Detailed information NTG0090744

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ82_RS21660
• Genome accession: NZ_AP027822
• Coordinates: 4415278..4416303 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017.17.01CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4410278..4421303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ82_RS21640 (VEE60_41980)	metJ	4411339..4411656 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ82_RS21645 (VEE60_41990)	yiiX	4411840..4412448 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ82_RS21650 (VEE60_42000)	rpmE	4412509..4412721 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ82_RS21655 (VEE60_42010)	priA	4412924..4415122 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABJ82_RS21660 (VEE60_42020)	cytR	4415278..4416303 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ82_RS21665 (VEE60_42030)	ftsN	4416395..4417354 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ82_RS21670 (VEE60_42040)	hslV	4417447..4417977 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ82_RS21675 (VEE60_42050)	hslU	4417987..4419318 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ82_RS21680 (VEE60_42060)	menA	4419385..4420311 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ82_RS21685 (VEE60_42070)	rraA	4420404..4420889 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ82_RS21690 (VEE60_42080)	zapB	4420974..4421219 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=90744 AABJ82_RS21660 WP_000644904.1 4415278..4416303(+) (cytR) [Escherichia coli strain 2017.17.01CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=90744 AABJ82_RS21660 WP_000644904.1 4415278..4416303(+) (cytR) [Escherichia coli strain 2017.17.01CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628