Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   TM2_RS05235 Genome accession   NZ_AP025262
Coordinates   1039084..1040034 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain TM2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1034084..1045034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TM2_RS05215 (TM2_09670) - 1035319..1035801 (+) 483 WP_236810359.1 hypothetical protein -
  TM2_RS05220 (TM2_09680) - 1035832..1037271 (-) 1440 WP_236810360.1 PLP-dependent aminotransferase family protein -
  TM2_RS05225 (TM2_09690) - 1037415..1038584 (+) 1170 WP_050827117.1 MFS transporter -
  TM2_RS05230 (TM2_09700) - 1038647..1038925 (+) 279 WP_039963454.1 barstar family protein -
  TM2_RS05235 (TM2_09710) ceuB 1039084..1040034 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  TM2_RS05240 (TM2_09720) - 1040027..1040977 (+) 951 WP_008348643.1 iron chelate uptake ABC transporter family permease subunit -
  TM2_RS05245 (TM2_09730) - 1040968..1041726 (+) 759 WP_181891762.1 ABC transporter ATP-binding protein -
  TM2_RS05250 (TM2_09740) - 1041749..1042693 (+) 945 WP_181891761.1 siderophore ABC transporter substrate-binding protein -
  TM2_RS05255 (TM2_09750) - 1042885..1043841 (+) 957 WP_048001719.1 LCP family protein -
  TM2_RS05260 (TM2_09760) - 1043876..1044310 (-) 435 WP_008348634.1 hypothetical protein -
  TM2_RS05265 (TM2_09770) - 1044397..1044759 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=90744 TM2_RS05235 WP_017366964.1 1039084..1040034(+) (ceuB) [Bacillus altitudinis strain TM2]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=90744 TM2_RS05235 WP_017366964.1 1039084..1040034(+) (ceuB) [Bacillus altitudinis strain TM2]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment