Detailed information NTG0907351

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SFA27_RS22425
• Genome accession: NZ_CP139139
• Coordinates: 4959947..4961056 (+)
• Length: 369 a.a.
• NCBI ID: WP_407295031.1
• Uniprot ID: -
• Organism: Chryseobacterium sp. HR92
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4954947..4966056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SFA27_RS22405 (SFA27_22360)	sufD	4955440..4956747 (+)	1308	WP_407298189.1	Fe-S cluster assembly protein SufD	-
SFA27_RS22410 (SFA27_22365)	-	4956819..4957742 (-)	924	WP_407295027.1	DUF3078 domain-containing protein	-
SFA27_RS22415 (SFA27_22370)	-	4957970..4958896 (-)	927	WP_047376154.1	DUF3078 domain-containing protein	-
SFA27_RS22420 (SFA27_22375)	-	4959145..4959912 (+)	768	WP_047376152.1	rhomboid family intramembrane serine protease	-
SFA27_RS22425 (SFA27_22380)	dprA	4959947..4961056 (+)	1110	WP_407295031.1	DNA-processing protein DprA	Machinery gene
SFA27_RS22430 (SFA27_22385)	gdhA	4961247..4962605 (+)	1359	WP_047376148.1	NADP-specific glutamate dehydrogenase	-
SFA27_RS22435 (SFA27_22390)	-	4962736..4963104 (+)	369	WP_047376146.1	iron chaperone	-
SFA27_RS22440 (SFA27_22395)	-	4963149..4963451 (-)	303	WP_264518909.1	hypothetical protein	-
SFA27_RS22445 (SFA27_22400)	-	4963682..4964170 (-)	489	WP_047376141.1	YkgJ family cysteine cluster protein	-
SFA27_RS22450 (SFA27_22405)	-	4964171..4965142 (-)	972	WP_047376139.1	ion channel	-
SFA27_RS22455 (SFA27_22410)	-	4965307..4965687 (+)	381	WP_047376134.1	group III truncated hemoglobin	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41489.38 Da
• Isoelectric Point: 7.2230

>NTDB_id=907351 SFA27_RS22425 WP_407295031.1 4959947..4961056(+) (dprA) [Chryseobacterium sp. HR92]
MISEEYFYTIALRECSQIGDIHFHKLVHTFGSAQEAWKRAKKEYKKLEGIGQKTVSDIGNKSHLEFAEEELNFCEKNNIR
IRLKHLSETPLLLNECNDAPAILYQKGKIDDTQSKVSIVGTRNMTGYGQKFIEDFFETTQSSRYTSVSGLALGVDKEVHE
QSILHRKSTVAVLAHGFQYLYPSKNRKLSEKILEEGGALITEFSSSRKPDRENFIQRNRIVAGMSPATIVVETGFGGGSV
STAAFANDYNRDVFALPGKITDICSQGCNQLIFHNKATAISTIKDLISMLGFNGPKEKIEELFPYSETLIQLPDNQYLIY
QSIKDQPQISLDDLAQKINIPTHKILPIILELELLGKVKSFSGRQFIAI

Nucleotide

• Length: 1110 bp

>NTDB_id=907351 SFA27_RS22425 WP_407295031.1 4959947..4961056(+) (dprA) [Chryseobacterium sp. HR92]
ATGATTTCCGAAGAATACTTTTACACAATCGCCCTCCGCGAATGCAGCCAGATAGGTGATATTCATTTTCATAAACTTGT
CCATACTTTTGGGAGTGCACAGGAAGCATGGAAAAGAGCAAAGAAAGAGTACAAAAAACTGGAAGGAATAGGACAAAAAA
CAGTTTCAGATATTGGAAATAAGTCTCATTTGGAATTCGCAGAAGAAGAATTAAATTTTTGCGAAAAGAATAATATCCGG
ATCAGGCTGAAGCATCTTAGTGAAACTCCTTTACTGCTTAACGAATGTAATGATGCCCCTGCTATTCTTTATCAGAAAGG
AAAGATTGATGATACACAGTCAAAAGTAAGTATTGTAGGAACCCGAAATATGACGGGCTATGGCCAAAAATTTATTGAAG
ACTTCTTTGAAACAACTCAATCTTCAAGATATACATCAGTAAGCGGACTTGCTTTGGGTGTTGACAAAGAGGTTCATGAG
CAGTCTATTCTTCACCGAAAATCTACTGTAGCGGTTCTTGCACATGGTTTCCAATATTTATATCCATCAAAGAACAGAAA
ACTTTCAGAGAAAATTTTGGAGGAAGGAGGCGCATTAATCACAGAGTTCAGTTCTTCCCGGAAACCAGACCGTGAAAACT
TCATTCAGAGAAATAGAATTGTAGCAGGAATGTCTCCCGCAACCATTGTGGTGGAAACCGGTTTTGGAGGAGGGTCTGTA
AGTACTGCTGCTTTTGCCAATGATTATAACCGTGACGTCTTTGCCCTCCCGGGAAAAATTACAGACATCTGCAGCCAGGG
ATGTAATCAGCTGATTTTCCATAATAAAGCGACAGCCATTTCTACTATAAAAGATCTTATAAGTATGCTTGGATTTAATG
GTCCTAAAGAAAAAATAGAAGAGTTATTTCCTTACAGCGAGACATTGATACAATTACCTGATAATCAATATTTAATATAT
CAATCTATTAAAGATCAACCTCAGATTTCTCTGGATGATCTGGCGCAGAAAATTAATATTCCCACCCACAAAATCTTACC
AATAATTTTGGAATTGGAACTTTTAGGGAAAGTAAAATCATTTTCCGGGAGGCAATTCATCGCAATTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (318-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	51.374	98.645	0.507