Detailed information NTG0907335

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SD427_RS18240
• Genome accession: NZ_CP139137
• Coordinates: 4131228..4132337 (-)
• Length: 369 a.a.
• NCBI ID: WP_320561063.1
• Uniprot ID: -
• Organism: Chryseobacterium sp. JJR-5R
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4126228..4137337

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SD427_RS18215 (SD427_18215)	-	4126908..4127873 (+)	966	WP_320559203.1	ion channel	-
SD427_RS18220 (SD427_18220)	-	4127879..4128367 (+)	489	WP_320559204.1	YkgJ family cysteine cluster protein	-
SD427_RS18225 (SD427_18225)	-	4128488..4128811 (+)	324	WP_320559205.1	hypothetical protein	-
SD427_RS18230 (SD427_18230)	-	4128983..4129489 (+)	507	WP_320559206.1	hypothetical protein	-
SD427_RS18235 (SD427_18235)	gdhA	4129679..4131037 (-)	1359	WP_056214137.1	NADP-specific glutamate dehydrogenase	-
SD427_RS18240 (SD427_18240)	dprA	4131228..4132337 (-)	1110	WP_320561063.1	DNA-processing protein DprA	Machinery gene
SD427_RS18245 (SD427_18245)	-	4132372..4133142 (-)	771	WP_320559207.1	rhomboid family intramembrane serine protease	-
SD427_RS18250 (SD427_18250)	-	4133413..4134339 (+)	927	WP_320559208.1	DUF3078 domain-containing protein	-
SD427_RS18255 (SD427_18255)	-	4134520..4134867 (+)	348	WP_320559209.1	tRNA-binding protein	-
SD427_RS18260 (SD427_18260)	-	4134930..4135634 (+)	705	WP_320559210.1	3'-5' exonuclease	-
SD427_RS18265 (SD427_18265)	-	4135638..4135964 (+)	327	WP_320559211.1	SUF system Fe-S cluster assembly protein	-
SD427_RS18270 (SD427_18270)	-	4136010..4136411 (-)	402	WP_320559212.1	OsmC family protein	-
SD427_RS18275 (SD427_18275)	-	4136440..4137288 (-)	849	WP_320559213.1	hydroxymethylglutaryl-CoA lyase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41340.45 Da
• Isoelectric Point: 8.0569

>NTDB_id=907335 SD427_RS18240 WP_320561063.1 4131228..4132337(-) (dprA) [Chryseobacterium sp. JJR-5R]
MYSEEHLYAIALRQCAFIGDINFYKLVRTFGGAKPAWELTPKEYKKLDGFGKKLIADIGNPEHLKFAEEELRFCEQNGIK
INLRHLNGLPQLLNECDDAPVILYQKGNFDDRKEKVSIVGTRNMTSYGSRFIQDFFEETQSCRYISVSGLALGVDKEVHE
QSILRNIPTVAVLAHGFHLLYPAKNRKLSEKILQEGGALLTEFNSSRKPDRENFIQRNRVVAGISPATIVVETAFGGGSI
STATFANQYNREVFALPGKITDRQSQGCNHLIYQNKAAAISTVKDLVDNLRLNKAEAKTGDLFTRSEVAVRLTESQELIL
SVISDHPKISLDDMIEKISLSSHKILPVILELELLGKVKSLSGRQFIVL

Nucleotide

• Length: 1110 bp

>NTDB_id=907335 SD427_RS18240 WP_320561063.1 4131228..4132337(-) (dprA) [Chryseobacterium sp. JJR-5R]
ATGTACTCTGAAGAACATCTTTATGCCATTGCTTTACGCCAATGTGCCTTTATCGGTGATATTAATTTTTACAAACTTGT
CCGTACTTTCGGGGGCGCCAAACCTGCCTGGGAACTAACACCGAAAGAATATAAAAAACTTGACGGTTTCGGCAAAAAGC
TTATTGCGGATATCGGAAATCCTGAACACCTGAAGTTTGCTGAAGAAGAACTCAGGTTCTGCGAACAGAACGGTATAAAA
ATTAATCTCAGGCACCTGAACGGGCTTCCGCAGCTTTTAAACGAATGCGATGATGCCCCGGTTATTCTTTACCAGAAAGG
AAATTTTGATGACCGTAAAGAAAAAGTAAGTATTGTCGGGACCCGGAATATGACCTCCTACGGAAGCCGCTTCATTCAGG
ATTTTTTTGAAGAAACACAATCCTGCCGTTACATTTCAGTGAGCGGCCTGGCTTTAGGAGTTGACAAGGAAGTCCACGAA
CAGTCTATCCTGCGGAATATTCCTACTGTAGCAGTGCTGGCTCACGGCTTTCACCTGTTGTATCCGGCTAAAAACAGGAA
GCTGTCTGAAAAGATCCTGCAGGAAGGCGGAGCTTTACTGACGGAGTTCAATTCGTCTCGGAAGCCGGACCGGGAAAACT
TCATTCAGAGAAACAGGGTGGTTGCCGGGATTTCACCGGCTACCATTGTGGTGGAAACCGCTTTCGGGGGCGGATCAATC
AGTACCGCCACATTCGCCAACCAATATAACCGGGAAGTTTTTGCACTCCCGGGAAAAATTACAGACAGGCAGAGCCAGGG
ATGCAACCATCTGATTTATCAGAATAAGGCGGCAGCAATTTCCACAGTTAAAGATCTTGTAGACAACCTGAGACTTAATA
AAGCGGAGGCGAAAACCGGAGACCTGTTTACCAGAAGTGAAGTGGCAGTCCGGTTAACTGAAAGCCAGGAATTAATATTA
TCTGTAATTTCAGACCATCCGAAGATTTCCCTGGATGATATGATTGAGAAAATCAGTCTCTCTTCCCATAAAATTTTACC
GGTAATTTTAGAATTGGAACTTTTGGGGAAAGTAAAATCACTTTCAGGGAGGCAATTTATAGTCCTGTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (312-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.044	99.458	0.518