Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SH592_RS05735 Genome accession   NZ_CP139053
Coordinates   1133280..1133936 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain Y-4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1128280..1138936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SH592_RS05710 (SH592_05710) oppF 1128810..1129727 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  SH592_RS05715 (SH592_05715) - 1129834..1131021 (+) 1188 WP_040238278.1 putative glycoside hydrolase -
  SH592_RS05720 (SH592_05720) - 1131139..1131717 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  SH592_RS05725 (SH592_05725) spx 1131895..1132290 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  SH592_RS05730 (SH592_05730) - 1132348..1133004 (-) 657 WP_007409109.1 TerC family protein -
  SH592_RS05735 (SH592_05735) mecA 1133280..1133936 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  SH592_RS05740 (SH592_05740) - 1134087..1135247 (+) 1161 WP_040238274.1 competence protein CoiA family protein -
  SH592_RS05745 (SH592_05745) pepF 1135475..1137304 (+) 1830 WP_007409107.1 oligoendopeptidase F Regulator
  SH592_RS05750 (SH592_05750) - 1137342..1137509 (-) 168 WP_003155026.1 hypothetical protein -
  SH592_RS05755 (SH592_05755) spxH 1137796..1138698 (-) 903 WP_015417215.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=907017 SH592_RS05735 WP_003155032.1 1133280..1133936(+) (mecA) [Bacillus velezensis strain Y-4]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=907017 SH592_RS05735 WP_003155032.1 1133280..1133936(+) (mecA) [Bacillus velezensis strain Y-4]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895