Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | IDSSA_RS08545 | Genome accession | NZ_AP025249 |
| Coordinates | 1716355..1716654 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain IDSA1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1711355..1721654
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IDSSA_RS08520 (IDSSA_0116580) | gcvPA | 1712567..1713913 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| IDSSA_RS08525 (IDSSA_0116590) | gcvT | 1713933..1715024 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IDSSA_RS08530 (IDSSA_0116600) | - | 1715183..1715707 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| IDSSA_RS08535 | - | 1715697..1715843 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| IDSSA_RS08540 (IDSSA_0116610) | comGF | 1715940..1716437 (-) | 498 | WP_001803317.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IDSSA_RS08545 (IDSSA_0116620) | comGE | 1716355..1716654 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| IDSSA_RS08550 (IDSSA_0116630) | comGD | 1716641..1717087 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IDSSA_RS08555 (IDSSA_0116640) | comGC | 1717065..1717376 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IDSSA_RS08560 (IDSSA_0116650) | comGB | 1717390..1718460 (-) | 1071 | WP_000775706.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IDSSA_RS08565 (IDSSA_0116660) | comGA | 1718432..1719406 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IDSSA_RS08570 (IDSSA_0116670) | - | 1719458..1720081 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| IDSSA_RS08575 (IDSSA_0116680) | - | 1720078..1720407 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| IDSSA_RS08580 (IDSSA_0116690) | - | 1720407..1721393 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| IDSSA_RS08585 (IDSSA_0116700) | - | 1721390..1721593 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=90691 IDSSA_RS08545 WP_000844413.1 1716355..1716654(-) (comGE) [Staphylococcus aureus strain IDSA1]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=90691 IDSSA_RS08545 WP_000844413.1 1716355..1716654(-) (comGE) [Staphylococcus aureus strain IDSA1]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |