Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   UXR36_RS06310 Genome accession   NZ_CP157773
Coordinates   1290357..1291508 (+) Length   383 a.a.
NCBI ID   WP_000020365.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN89     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1285357..1296508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR36_RS06285 (UXR36_006285) - 1286186..1287472 (+) 1287 WP_000664766.1 pitrilysin family protein -
  UXR36_RS06290 (UXR36_006290) - 1287472..1288176 (+) 705 WP_000646222.1 SDR family NAD(P)-dependent oxidoreductase -
  UXR36_RS06295 (UXR36_006295) - 1288281..1289108 (+) 828 WP_000214890.1 YmfK family protein -
  UXR36_RS06300 (UXR36_006300) - 1289127..1289519 (+) 393 WP_000859445.1 RodZ family helix-turn-helix domain-containing protein -
  UXR36_RS06305 (UXR36_006305) pgsA 1289553..1290131 (+) 579 WP_001025090.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  UXR36_RS06310 (UXR36_006310) cinA 1290357..1291508 (+) 1152 WP_000020365.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  UXR36_RS06315 (UXR36_006315) recA 1291673..1292716 (+) 1044 WP_000368166.1 recombinase RecA -
  UXR36_RS06320 (UXR36_006320) rny 1293070..1294629 (+) 1560 WP_001050913.1 ribonuclease Y -
  UXR36_RS06325 (UXR36_006325) - 1294927..1295142 (-) 216 WP_000026308.1 hypothetical protein -
  UXR36_RS06330 (UXR36_006330) - 1295316..1296113 (+) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43189.55 Da        Isoelectric Point: 6.4455

>NTDB_id=906503 UXR36_RS06310 WP_000020365.1 1290357..1291508(+) (cinA) [Staphylococcus aureus strain BSN89]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQVMTPNNKQQALVIEGSTVLANHHGMAPGMIVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETVLIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LYRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNLEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=906503 UXR36_RS06310 WP_000020365.1 1290357..1291508(+) (cinA) [Staphylococcus aureus strain BSN89]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGTAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATAGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTA
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAGTATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCAGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAGCAAGAAATT
CTTTATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTATTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
AGAATTTAAAACTGAACAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.389

100

0.433