Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   UXR36_RS01760 Genome accession   NZ_CP157773
Coordinates   393123..393968 (+) Length   281 a.a.
NCBI ID   WP_001621659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN89     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 388123..398968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR36_RS01745 (UXR36_001745) - 388391..390232 (-) 1842 WP_182054857.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  UXR36_RS01750 (UXR36_001750) metC 390201..391361 (-) 1161 WP_000175862.1 cystathionine beta-lyase MetC -
  UXR36_RS01755 (UXR36_001755) - 391358..392461 (-) 1104 WP_000655695.1 PLP-dependent transferase -
  UXR36_RS01760 (UXR36_001760) spo0J 393123..393968 (+) 846 WP_001621659.1 ParB/RepB/Spo0J family partition protein Regulator
  UXR36_RS01765 (UXR36_001765) - 394122..395003 (+) 882 WP_000373079.1 mechanosensitive ion channel family protein -
  UXR36_RS01770 (UXR36_001770) - 395033..395236 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  UXR36_RS01775 (UXR36_001775) ychF 395248..396345 (+) 1098 WP_001218729.1 redox-regulated ATPase YchF -
  UXR36_RS01780 (UXR36_001780) - 396431..396622 (-) 192 WP_001052483.1 hypothetical protein -
  UXR36_RS01785 (UXR36_001785) rpsF 396866..397162 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  UXR36_RS01790 (UXR36_001790) ssbA 397183..397686 (+) 504 WP_031825290.1 single-stranded DNA-binding protein Machinery gene
  UXR36_RS01795 (UXR36_001795) rpsR 397738..397980 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.82 Da        Isoelectric Point: 10.0000

>NTDB_id=906468 UXR36_RS01760 WP_001621659.1 393123..393968(+) (spo0J) [Staphylococcus aureus strain BSN89]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=906468 UXR36_RS01760 WP_001621659.1 393123..393968(+) (spo0J) [Staphylococcus aureus strain BSN89]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381