Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AABJ72_RS05465 | Genome accession | NZ_AP027818 |
| Coordinates | 1125450..1125965 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130211.1 | Uniprot ID | A0ABR8T9Y4 |
| Organism | Escherichia coli strain 2017.15.02CC | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1120450..1130965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ72_RS05420 (VEE59_10600) | csrA | 1121037..1121222 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| AABJ72_RS05450 (VEE59_10610) | yqaB | 1122680..1123246 (+) | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| AABJ72_RS05455 (VEE59_10620) | yqaA | 1123243..1123671 (+) | 429 | WP_001287454.1 | YqaA family protein | - |
| AABJ72_RS05460 (VEE59_10630) | gshA | 1123744..1125300 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| AABJ72_RS05465 (VEE59_10640) | luxS | 1125450..1125965 (+) | 516 | WP_001130211.1 | S-ribosylhomocysteine lyase | Regulator |
| AABJ72_RS05470 (VEE59_10650) | emrB | 1126029..1127567 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| AABJ72_RS05475 (VEE59_10660) | emrA | 1127584..1128756 (-) | 1173 | WP_001326681.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| AABJ72_RS05480 (VEE59_10670) | emrR | 1128883..1129413 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| AABJ72_RS05485 (VEE59_10680) | ygaH | 1129504..1129839 (-) | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| AABJ72_RS05490 (VEE59_10690) | ygaZ | 1129829..1130566 (-) | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19416.19 Da Isoelectric Point: 5.0362
>NTDB_id=90614 AABJ72_RS05465 WP_001130211.1 1125450..1125965(+) (luxS) [Escherichia coli strain 2017.15.02CC]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=90614 AABJ72_RS05465 WP_001130211.1 1125450..1125965(+) (luxS) [Escherichia coli strain 2017.15.02CC]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.099 |
100 |
0.731 |