Detailed information NTG0906086

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: ABLU27_RS10525
• Genome accession: NZ_CP157500
• Coordinates: 1986995..1988065 (-)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis strain 2B-9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1981995..1993065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLU27_RS10510 (ABLU27_10495)	-	1982998..1983141 (+)	144	Protein_1930	DNA processing protein DprA	-
ABLU27_RS10515 (ABLU27_10500)	topA	1983403..1985535 (+)	2133	Protein_1931	type I DNA topoisomerase	-
ABLU27_RS10520 (ABLU27_10505)	trmFO	1985607..1986950 (+)	1344	WP_033899770.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
ABLU27_RS10525 (ABLU27_10510)	xerS	1986995..1988065 (-)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
ABLU27_RS10530 (ABLU27_10515)	-	1988549..1988836 (-)	288	WP_015426413.1	hypothetical protein	-
ABLU27_RS10535 (ABLU27_10520)	xerS	1988920..1989975 (-)	1056	WP_406834447.1	tyrosine recombinase XerS	Machinery gene
ABLU27_RS10540 (ABLU27_10525)	-	1990678..1991607 (-)	930	WP_406834448.1	N(5)-(carboxyethyl)ornithine synthase	-
ABLU27_RS10545 (ABLU27_10530)	-	1991674..1991850 (-)	177	Protein_1937	CorA family divalent cation transporter	-
ABLU27_RS10550 (ABLU27_10535)	-	1991984..1992535 (-)	552	WP_406834449.1	Asp23/Gls24 family envelope stress response protein	-
ABLU27_RS10555 (ABLU27_10540)	-	1992556..1992744 (-)	189	WP_011835142.1	DUF2273 domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=906086 ABLU27_RS10525 WP_003131037.1 1986995..1988065(-) (xerS) [Lactococcus lactis strain 2B-9]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=906086 ABLU27_RS10525 WP_003131037.1 1986995..1988065(-) (xerS) [Lactococcus lactis strain 2B-9]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTAACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGACGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767