Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ABLU27_RS05980 Genome accession   NZ_CP157500
Coordinates   1094032..1094814 (+) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis strain 2B-9     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1089032..1099814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLU27_RS05955 (ABLU27_05955) vicX 1089058..1089870 (-) 813 WP_311875190.1 MBL fold metallo-hydrolase Regulator
  ABLU27_RS05960 (ABLU27_05960) vicK 1090038..1091480 (-) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  ABLU27_RS05965 (ABLU27_05965) yycF 1091473..1092174 (-) 702 WP_003131580.1 response regulator YycF -
  ABLU27_RS05970 (ABLU27_05970) tmk 1092352..1092987 (+) 636 WP_012897230.1 dTMP kinase -
  ABLU27_RS05975 (ABLU27_05975) - 1093120..1093980 (+) 861 WP_058212446.1 DNA polymerase III subunit delta' -
  ABLU27_RS05980 (ABLU27_05980) yaaT 1094032..1094814 (+) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  ABLU27_RS05985 (ABLU27_05985) yabA 1094807..1095133 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  ABLU27_RS05990 (ABLU27_05990) rsmI 1095133..1096008 (+) 876 WP_058212447.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ABLU27_RS05995 (ABLU27_05995) - 1096085..1096276 (-) 192 WP_003131566.1 hypothetical protein -
  ABLU27_RS06000 (ABLU27_06000) mvk 1096339..1097271 (-) 933 WP_058212448.1 mevalonate kinase -
  ABLU27_RS06005 (ABLU27_06005) mvaD 1097577..1098533 (+) 957 WP_058210870.1 diphosphomevalonate decarboxylase -
  ABLU27_RS06010 (ABLU27_06010) - 1098520..1099509 (+) 990 WP_406835319.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=906068 ABLU27_RS05980 WP_010905316.1 1094032..1094814(+) (yaaT) [Lactococcus lactis strain 2B-9]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=906068 ABLU27_RS05980 WP_010905316.1 1094032..1094814(+) (yaaT) [Lactococcus lactis strain 2B-9]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388