Detailed information NTG0905997

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: ABLU29_RS09515
• Genome accession: NZ_CP157498
• Coordinates: 1822182..1823252 (+)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis strain 2B-5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1817182..1828252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLU29_RS09485 (ABLU29_09470)	-	1817503..1817691 (+)	189	WP_011835142.1	DUF2273 domain-containing protein	-
ABLU29_RS09490 (ABLU29_09475)	-	1817712..1818263 (+)	552	WP_406834449.1	Asp23/Gls24 family envelope stress response protein	-
ABLU29_RS09495 (ABLU29_09480)	-	1818397..1818573 (+)	177	Protein_1738	CorA family divalent cation transporter	-
ABLU29_RS09500 (ABLU29_09485)	-	1818640..1819569 (+)	930	WP_406834448.1	N(5)-(carboxyethyl)ornithine synthase	-
ABLU29_RS09505 (ABLU29_09490)	xerS	1820272..1821327 (+)	1056	WP_406834447.1	tyrosine recombinase XerS	Machinery gene
ABLU29_RS09510 (ABLU29_09495)	-	1821411..1821698 (+)	288	WP_015426413.1	hypothetical protein	-
ABLU29_RS09515 (ABLU29_09500)	xerS	1822182..1823252 (+)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
ABLU29_RS09520 (ABLU29_09505)	trmFO	1823297..1824640 (-)	1344	WP_033899770.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
ABLU29_RS09525 (ABLU29_09510)	topA	1824712..1826844 (-)	2133	WP_058204440.1	type I DNA topoisomerase	-
ABLU29_RS09530 (ABLU29_09515)	-	1827106..1827249 (-)	144	Protein_1745	DNA processing protein DprA	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=905997 ABLU29_RS09515 WP_003131037.1 1822182..1823252(+) (xerS) [Lactococcus lactis strain 2B-5]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=905997 ABLU29_RS09515 WP_003131037.1 1822182..1823252(+) (xerS) [Lactococcus lactis strain 2B-5]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTTG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTAACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGACGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767