Detailed information NTG0905910

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: ABLU28_RS09115
• Genome accession: NZ_CP157495
• Coordinates: 1822184..1823254 (+)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis strain 2B-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1817184..1828254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLU28_RS09085 (ABLU28_09065)	-	1817505..1817693 (+)	189	WP_011835142.1	DUF2273 domain-containing protein	-
ABLU28_RS09090 (ABLU28_09070)	-	1817714..1818265 (+)	552	WP_406834449.1	Asp23/Gls24 family envelope stress response protein	-
ABLU28_RS09095 (ABLU28_09075)	-	1818399..1818575 (+)	177	Protein_1742	CorA family divalent cation transporter	-
ABLU28_RS09100 (ABLU28_09080)	-	1818642..1819571 (+)	930	WP_406834448.1	N(5)-(carboxyethyl)ornithine synthase	-
ABLU28_RS09105 (ABLU28_09085)	xerS	1820274..1821329 (+)	1056	WP_406834447.1	tyrosine recombinase XerS	Machinery gene
ABLU28_RS09110 (ABLU28_09090)	-	1821413..1821700 (+)	288	WP_015426413.1	hypothetical protein	-
ABLU28_RS09115 (ABLU28_09095)	xerS	1822184..1823254 (+)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
ABLU28_RS09120 (ABLU28_09100)	trmFO	1823299..1824642 (-)	1344	WP_033899770.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
ABLU28_RS09125 (ABLU28_09105)	topA	1824714..1826846 (-)	2133	WP_058204440.1	type I DNA topoisomerase	-
ABLU28_RS09130 (ABLU28_09110)	-	1827108..1827251 (-)	144	Protein_1749	DNA processing protein DprA	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=905910 ABLU28_RS09115 WP_003131037.1 1822184..1823254(+) (xerS) [Lactococcus lactis strain 2B-1]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=905910 ABLU28_RS09115 WP_003131037.1 1822184..1823254(+) (xerS) [Lactococcus lactis strain 2B-1]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTAACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGACGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767