Detailed information NTG0090580

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ88_RS22025
• Genome accession: NZ_AP027813
• Coordinates: 4513847..4514872 (+)
• Length: 341 a.a.
• NCBI ID: WP_124846218.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2017.13.01CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4508847..4519872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ88_RS22005 (VEE58_42680)	metJ	4509908..4510225 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ88_RS22010 (VEE58_42690)	yiiX	4510409..4511017 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ88_RS22015 (VEE58_42700)	rpmE	4511078..4511290 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ88_RS22020 (VEE58_42710)	priA	4511493..4513691 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
AABJ88_RS22025 (VEE58_42720)	cytR	4513847..4514872 (+)	1026	WP_124846218.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ88_RS22030 (VEE58_42730)	ftsN	4514964..4515923 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ88_RS22035 (VEE58_42740)	hslV	4516016..4516546 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ88_RS22040 (VEE58_42750)	hslU	4516556..4517887 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ88_RS22045 (VEE58_42760)	menA	4517954..4518880 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ88_RS22050 (VEE58_42770)	rraA	4518973..4519458 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ88_RS22055 (VEE58_42780)	zapB	4519543..4519788 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37835.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=90580 AABJ88_RS22025 WP_124846218.1 4513847..4514872(+) (cytR) [Escherichia coli strain 2017.13.01CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTASNHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=90580 AABJ88_RS22025 WP_124846218.1 4513847..4514872(+) (cytR) [Escherichia coli strain 2017.13.01CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGTCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628