Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BSG8_RS07555 Genome accession   NZ_AP025224
Coordinates   1411310..1411885 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain G8     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1406310..1416885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSG8_RS07525 (BSG8_14750) dapD 1406498..1407208 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BSG8_RS07530 (BSG8_14760) dapI 1407278..1408402 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  BSG8_RS07535 (BSG8_14770) ykuS 1408464..1408709 (+) 246 WP_003232382.1 YkuS family protein -
  BSG8_RS07540 (BSG8_14780) mscT 1408746..1409549 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BSG8_RS07545 (BSG8_14790) ahpA 1409786..1410328 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BSG8_RS07550 (BSG8_14800) ykuV 1410398..1410844 (+) 447 WP_014479665.1 thiol-disulfide oxidoreductase YkuV -
  BSG8_RS07555 (BSG8_14810) rok 1411310..1411885 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  BSG8_RS07560 (BSG8_14820) cse15 1412125..1413090 (-) 966 WP_014479669.1 spore protein Cse15 -
  BSG8_RS07565 (BSG8_14830) mobA 1413227..1413826 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  BSG8_RS07570 (BSG8_14840) moeB 1413877..1414896 (+) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -
  BSG8_RS07575 (BSG8_14850) glp 1414914..1416206 (+) 1293 WP_014479672.1 gephyrin-like molybdotransferase Glp -
  BSG8_RS07580 (BSG8_14860) mobB 1416167..1416688 (+) 522 WP_014479673.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=90552 BSG8_RS07555 WP_003232378.1 1411310..1411885(+) (rok) [Bacillus subtilis subsp. natto strain G8]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=90552 BSG8_RS07555 WP_003232378.1 1411310..1411885(+) (rok) [Bacillus subtilis subsp. natto strain G8]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment