Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ABLB99_RS02345 Genome accession   NZ_CP157447
Coordinates   483416..484300 (+) Length   294 a.a.
NCBI ID   WP_017392659.1    Uniprot ID   A0AA36K9G4
Organism   Acinetobacter nosocomialis strain XH1727     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 478416..489300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLB99_RS02320 (ABLB99_02320) - 478808..480055 (-) 1248 WP_002050751.1 YihY family inner membrane protein -
  ABLB99_RS02325 (ABLB99_02325) wrbA 480336..480938 (+) 603 WP_004884550.1 NAD(P)H:quinone oxidoreductase -
  ABLB99_RS02330 (ABLB99_02330) - 480993..481568 (-) 576 WP_002050789.1 xanthine phosphoribosyltransferase -
  ABLB99_RS02335 (ABLB99_02335) - 481640..482353 (-) 714 WP_002050776.1 DUF3108 domain-containing protein -
  ABLB99_RS02340 (ABLB99_02340) - 482511..483182 (-) 672 WP_004884549.1 hypothetical protein -
  ABLB99_RS02345 (ABLB99_02345) tonB2 483416..484300 (+) 885 WP_017392659.1 energy transducer TonB Machinery gene
  ABLB99_RS02350 (ABLB99_02350) ybeY 484389..484865 (-) 477 WP_004711856.1 rRNA maturation RNase YbeY -
  ABLB99_RS02355 (ABLB99_02355) - 484875..485963 (-) 1089 WP_002050786.1 PhoH family protein -
  ABLB99_RS02360 (ABLB99_02360) miaB 486001..487452 (-) 1452 WP_002050781.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33614.47 Da        Isoelectric Point: 9.4514

>NTDB_id=905508 ABLB99_RS02345 WP_017392659.1 483416..484300(+) (tonB2) [Acinetobacter nosocomialis strain XH1727]
MLKKRSLSIEPFHYWWQDRVFIVAIILAILLHTFVLLIHFVMPAPSEQSTKEIAISVRPTEEIVKHADFLAQADQQGSGT
FRAAHRMSSNSPTPMPTDASTGDAQLDTLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=905508 ABLB99_RS02345 WP_017392659.1 483416..484300(+) (tonB2) [Acinetobacter nosocomialis strain XH1727]
ATGTTGAAAAAAAGAAGTCTTTCTATAGAGCCTTTTCATTATTGGTGGCAAGACCGAGTCTTTATTGTCGCGATAATACT
CGCAATCTTATTGCATACTTTTGTGCTGCTCATCCATTTTGTGATGCCTGCACCATCAGAACAATCGACTAAAGAAATTG
CGATATCGGTTCGTCCTACAGAAGAGATCGTTAAGCATGCAGACTTTTTAGCTCAAGCAGACCAGCAGGGTTCGGGAACT
TTTCGAGCGGCTCATCGAATGTCCAGTAATTCTCCGACGCCTATGCCGACTGATGCTTCAACTGGCGATGCTCAGCTAGA
CACTTTGGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTATTAATGACTGTGTTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGGAAAAAAGCACTTGAACAGTTACAGAGCCAATTTCAAGCAAAAGCTGCAATGGTCGCAAGT
CTTGAAGCTCAATATTTGCAACGTCAGCAAGATTTCAGCCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCCTCAGCAGCTTATCTAGATAAATTCCGTGAAAAAGTAGAGCTTTACGGTAACCGCTATTATCCAGAAGAAG
CCAAGCAGCAACAGCTAAAAGGTGAAGTCCGCCTTATGGTGATTTTAAATGCTCAAGGGGGAATTCGTGCAATTCGTTTA
CTTGAAAGTTCAGGGCATCCAGTTTTAGATGAGGCAGCAAAGGCATCAGTACGTCGTGGAGCGCCGTTTGGTCGTTTTGA
TGCAAATATGAAGGATATTTCCGAGCTACGTATTGTACGTACTTGGCGTTTTGATCCAGCTGAAGCCGAGTTTGAAGTTC
ATTAA

Domains

Predicted by InterProScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K9G4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

94.898

100

0.949