Detailed information    

insolico Bioinformatically predicted

Overview


Name   nucA/comI   Type   Machinery gene
Locus tag   BSG8_RS01730 Genome accession   NZ_AP025224
Coordinates   320110..320559 (-) Length   149 a.a.
NCBI ID   WP_014475770.1    Uniprot ID   A0A0D1KPR3
Organism   Bacillus subtilis subsp. natto strain G8     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 315110..325559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSG8_RS01690 - 315435..315632 (+) 198 WP_121509395.1 hypothetical protein -
  BSG8_RS01695 (BSG8_03360) yckC 315652..316107 (+) 456 WP_014478793.1 RDD family protein -
  BSG8_RS01700 (BSG8_03370) yckD 316189..316521 (+) 333 WP_014478794.1 YckD family protein -
  BSG8_RS01705 (BSG8_03380) - 316649..317071 (+) 423 WP_014478795.1 MarR family transcriptional regulator -
  BSG8_RS01710 (BSG8_03390) - 317059..317379 (+) 321 WP_014478796.1 DUF3147 family protein -
  BSG8_RS01715 (BSG8_03400) - 317398..318142 (+) 745 Protein_333 AAA family ATPase -
  BSG8_RS01720 (BSG8_03420) bglC 318215..319648 (+) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  BSG8_RS01725 (BSG8_03430) nin/comJ 319685..320083 (-) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  BSG8_RS01730 (BSG8_03440) nucA/comI 320110..320559 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  BSG8_RS01735 tlpC 320727..322448 (-) 1722 Protein_337 methyl-accepting chemotaxis protein TlpC -
  BSG8_RS01740 (BSG8_03470) hxlB 322559..323116 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  BSG8_RS01745 (BSG8_03480) hxlA 323122..323754 (-) 633 WP_014478804.1 3-hexulose-6-phosphate synthase -
  BSG8_RS01750 (BSG8_03490) hxlR 323983..324345 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 149 a.a.        Molecular weight: 16440.39 Da        Isoelectric Point: 4.5282

>NTDB_id=90529 BSG8_RS01730 WP_014475770.1 320110..320559(-) (nucA/comI) [Bacillus subtilis subsp. natto strain G8]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ

Nucleotide


Download         Length: 450 bp        

>NTDB_id=90529 BSG8_RS01730 WP_014475770.1 320110..320559(-) (nucA/comI) [Bacillus subtilis subsp. natto strain G8]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1KPR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

98.658

100

0.987


Multiple sequence alignment