Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BSG8_RS00165 | Genome accession | NZ_AP025224 |
| Coordinates | 25134..25424 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. natto strain G8 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 20134..30424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSG8_RS00125 (BSG8_00220) | darA | 20157..20486 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| BSG8_RS00130 (BSG8_00230) | yaaR | 20499..20939 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| BSG8_RS00135 (BSG8_00240) | holB | 20951..21940 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| BSG8_RS00140 (BSG8_00250) | ricT | 21943..22770 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| BSG8_RS00145 (BSG8_00260) | yabA | 22785..23144 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BSG8_RS00150 (BSG8_00270) | trmNF | 23203..23946 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BSG8_RS00155 (BSG8_00280) | yazA | 23933..24232 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| BSG8_RS00160 (BSG8_00290) | rsmI | 24207..25085 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BSG8_RS00165 (BSG8_00300) | abrB | 25134..25424 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BSG8_RS00170 (BSG8_00310) | metG | 25919..27913 (+) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| BSG8_RS00175 (BSG8_00320) | dayD | 27993..28760 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| BSG8_RS00180 (BSG8_00330) | yabE | 28916..30229 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=90524 BSG8_RS00165 WP_003226760.1 25134..25424(-) (abrB) [Bacillus subtilis subsp. natto strain G8]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=90524 BSG8_RS00165 WP_003226760.1 25134..25424(-) (abrB) [Bacillus subtilis subsp. natto strain G8]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |