Detailed information NTG0904992

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: ABKP32_RS15100
• Genome accession: NZ_CP157342
• Coordinates: 3172749..3174197 (-)
• Length: 482 a.a.
• NCBI ID: WP_000778202.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 2024CK-00538
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3167749..3179197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKP32_RS15075 (ABKP32_15075)	hisD	3168510..3169799 (-)	1290	WP_001253721.1	histidinol dehydrogenase	-
ABKP32_RS15080 (ABKP32_15080)	hisG	3169905..3170588 (-)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
ABKP32_RS15085 (ABKP32_15085)	murA	3170588..3171844 (-)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ABKP32_RS15090 (ABKP32_15090)	ibaG	3171851..3172102 (-)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
ABKP32_RS15095 (ABKP32_15095)	raiA	3172242..3172580 (-)	339	WP_001167461.1	ribosome-associated translation inhibitor RaiA	-
ABKP32_RS15100 (ABKP32_15100)	rpoN/rpoN1	3172749..3174197 (-)	1449	WP_000778202.1	RNA polymerase factor sigma-54	Machinery gene

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55082.97 Da
• Isoelectric Point: 4.6620

>NTDB_id=904992 ABKP32_RS15100 WP_000778202.1 3172749..3174197(-) (rpoN/rpoN1) [Acinetobacter baumannii strain 2024CK-00538]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=904992 ABKP32_RS15100 WP_000778202.1 3172749..3174197(-) (rpoN/rpoN1) [Acinetobacter baumannii strain 2024CK-00538]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAATTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACACAAAGAAACAGATGACCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTTCACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTACATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTCTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATCGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTC
GAGAAACTGAATATTTGAAAGAAGCCAGAAGTCTACTTCAATATTACGAATTACTGATTGCGAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAAGAACAATTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAGTATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAACCCTGATGTGATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGGGCAGATCAAAGTGATGAT
AATTTATACCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGGCACAAAACATTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCTTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACAACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACAGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
GATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAGG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.333	100	0.459