Detailed information NTG0090497

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ86_RS21685
• Genome accession: NZ_AP027800
• Coordinates: 4414952..4415977 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017.10.01CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4409952..4420977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ86_RS21665 (VEE56_41550)	metJ	4411013..4411330 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ86_RS21670 (VEE56_41560)	yiiX	4411514..4412122 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ86_RS21675 (VEE56_41570)	rpmE	4412183..4412395 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ86_RS21680 (VEE56_41580)	priA	4412598..4414796 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABJ86_RS21685 (VEE56_41590)	cytR	4414952..4415977 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ86_RS21690 (VEE56_41600)	ftsN	4416069..4417028 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ86_RS21695 (VEE56_41610)	hslV	4417121..4417651 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ86_RS21700 (VEE56_41620)	hslU	4417661..4418992 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ86_RS21705 (VEE56_41630)	menA	4419059..4419985 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ86_RS21710 (VEE56_41640)	rraA	4420078..4420563 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ86_RS21715 (VEE56_41650)	zapB	4420648..4420893 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=90497 AABJ86_RS21685 WP_000644904.1 4414952..4415977(+) (cytR) [Escherichia coli strain 2017.10.01CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=90497 AABJ86_RS21685 WP_000644904.1 4414952..4415977(+) (cytR) [Escherichia coli strain 2017.10.01CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628