Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   SGW66_RS13345 Genome accession   NZ_CP138669
Coordinates   2710780..2711496 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain DA70710     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2705780..2716496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW66_RS13325 - 2706872..2707822 (+) 951 WP_029549347.1 LacI family DNA-binding transcriptional regulator -
  SGW66_RS13330 - 2707971..2709455 (+) 1485 WP_000141419.1 sucrose-6-phosphate hydrolase -
  SGW66_RS13335 - 2709452..2710411 (+) 960 WP_001253295.1 carbohydrate kinase -
  SGW66_RS13340 - 2710601..2710708 (-) 108 WP_031785433.1 hypothetical protein -
  SGW66_RS13345 agrA 2710780..2711496 (-) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  SGW66_RS13350 - 2711515..2712807 (-) 1293 WP_001657119.1 GHKL domain-containing protein -
  SGW66_RS13355 - 2712832..2712972 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  SGW66_RS13360 agrB 2712969..2713538 (-) 570 WP_001105708.1 accessory gene regulator AgrB -
  SGW66_RS13365 hld 2713827..2713907 (+) 81 WP_000046022.1 delta-hemolysin -
  SGW66_RS13370 - 2714508..2715293 (-) 786 WP_000867944.1 carbon-nitrogen family hydrolase -
  SGW66_RS13375 - 2715654..2716280 (-) 627 WP_000522375.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=904443 SGW66_RS13345 WP_000688492.1 2710780..2711496(-) (agrA) [Staphylococcus aureus strain DA70710]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=904443 SGW66_RS13345 WP_000688492.1 2710780..2711496(-) (agrA) [Staphylococcus aureus strain DA70710]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAGGATGATCCAGCAGAATTAAGAACACGTATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCTGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACTAAGTCACACAGACTCATTGCGCATTTAGACAATCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGCTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATTG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1