Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   SGW58_RS00455 Genome accession   NZ_CP138666
Coordinates   82557..83600 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain DA70300     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 77557..88600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW58_RS00425 - 78046..78156 (+) 111 WP_001790257.1 hypothetical protein -
  SGW58_RS00430 - 78185..78598 (+) 414 WP_001643743.1 hypothetical protein -
  SGW58_RS00435 - 78787..79773 (-) 987 WP_001014423.1 aromatic acid exporter family protein -
  SGW58_RS00440 map 80473..81231 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  SGW58_RS00445 - 81448..81844 (+) 397 Protein_88 hypothetical protein -
  SGW58_RS00450 liaF 81859..82560 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  SGW58_RS00455 vraS 82557..83600 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  SGW58_RS00460 vraR 83590..84219 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  SGW58_RS00465 - 84332..85549 (-) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  SGW58_RS00470 - 85827..86102 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  SGW58_RS00475 - 86109..86573 (-) 465 WP_000228670.1 low molecular weight protein-tyrosine-phosphatase -
  SGW58_RS00480 - 86720..86920 (+) 201 WP_000180460.1 DUF1128 family protein -
  SGW58_RS00485 - 86923..88179 (+) 1257 WP_001793983.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=904320 SGW58_RS00455 WP_001017131.1 82557..83600(+) (vraS) [Staphylococcus aureus strain DA70300]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=904320 SGW58_RS00455 WP_001017131.1 82557..83600(+) (vraS) [Staphylococcus aureus strain DA70300]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGACTT
ATACCATACACTTGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1