Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   SGW61_RS13030 Genome accession   NZ_CP138664
Coordinates   2625734..2626621 (-) Length   295 a.a.
NCBI ID   WP_000143415.1    Uniprot ID   -
Organism   Staphylococcus aureus strain DA70504     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2620734..2631621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW61_RS13000 - 2620741..2620829 (+) 89 Protein_2519 hypothetical protein -
  SGW61_RS13005 - 2620937..2621434 (-) 498 WP_001065267.1 glutathione peroxidase -
  SGW61_RS13010 - 2621444..2621704 (-) 261 WP_072468805.1 hypothetical protein -
  SGW61_RS13015 - 2622086..2622199 (-) 114 WP_072468803.1 hypothetical protein -
  SGW61_RS13020 - 2622874..2624874 (-) 2001 WP_338439079.1 ABC transporter permease -
  SGW61_RS13025 - 2624871..2625626 (-) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  SGW61_RS13030 braS 2625734..2626621 (-) 888 WP_000143415.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SGW61_RS13035 braR 2626632..2627297 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SGW61_RS13040 - 2627323..2627523 (-) 201 WP_000604722.1 hypothetical protein -
  SGW61_RS13045 - 2627721..2629145 (+) 1425 WP_000953745.1 alkaline phosphatase -
  SGW61_RS13050 - 2629215..2629325 (+) 111 WP_001791296.1 hypothetical protein -
  SGW61_RS13055 - 2629428..2629883 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SGW61_RS13060 - 2630123..2630884 (-) 762 WP_000323450.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34059.30 Da        Isoelectric Point: 5.6141

>NTDB_id=904318 SGW61_RS13030 WP_000143415.1 2625734..2626621(-) (braS) [Staphylococcus aureus strain DA70504]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKDDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEGDLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQISNHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=904318 SGW61_RS13030 WP_000143415.1 2625734..2626621(-) (braS) [Staphylococcus aureus strain DA70504]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAGATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCGAATGTTGTGAATCGTGTTCGTCAAGAGGTAATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATAAACAATATTATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGAATCGGTATTAGTGAGGGAGACTTACCTAAA
ATATTCGACAAAGGTTATTCGGGGTATAATGGACAACGTCAAAGTAATTCAACTGGGATTGGCTTATTTATTGTAAAGCA
AATTTCAAATCACACTAATCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

97.966

100

0.98