Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SGW56_RS10520 Genome accession   NZ_CP138663
Coordinates   2133240..2133905 (+) Length   221 a.a.
NCBI ID   WP_338447613.1    Uniprot ID   -
Organism   Staphylococcus aureus strain DA70518     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2128240..2138905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW56_RS10495 - 2129653..2130414 (+) 762 WP_000323450.1 alpha/beta hydrolase family protein -
  SGW56_RS10500 - 2130654..2131109 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SGW56_RS10505 - 2131231..2131332 (+) 102 WP_000731972.1 SE2200 family small protein -
  SGW56_RS10510 - 2131392..2132816 (-) 1425 WP_000953745.1 alkaline phosphatase -
  SGW56_RS10515 - 2133014..2133214 (+) 201 WP_000604722.1 hypothetical protein -
  SGW56_RS10520 braR 2133240..2133905 (+) 666 WP_338447613.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SGW56_RS10525 braS 2133916..2134803 (+) 888 WP_000143415.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SGW56_RS10530 - 2134911..2135666 (+) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  SGW56_RS10535 - 2135663..2137662 (+) 2000 Protein_2038 ABC transporter permease -
  SGW56_RS10540 - 2138337..2138450 (+) 114 WP_072468803.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25461.58 Da        Isoelectric Point: 4.9346

>NTDB_id=904272 SGW56_RS10520 WP_338447613.1 2133240..2133905(+) (braR) [Staphylococcus aureus strain DA70518]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPRLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=904272 SGW56_RS10520 WP_338447613.1 2133240..2133905(+) (braR) [Staphylococcus aureus strain DA70518]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCGGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGTCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991