Detailed information NTG0903971

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABH274_RS23835
• Genome accession: NZ_CP157262
• Coordinates: 4932309..4933334 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GABEEC132
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4927309..4938334

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH274_RS23815 (ABH274_23805)	metJ	4928494..4928811 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABH274_RS23820 (ABH274_23810)	yiiX	4928871..4929479 (+)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
ABH274_RS23825 (ABH274_23815)	rpmE	4929540..4929752 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABH274_RS23830 (ABH274_23820)	priA	4929955..4932153 (+)	2199	WP_001305041.1	primosomal protein N'	Machinery gene
ABH274_RS23835 (ABH274_23825)	cytR	4932309..4933334 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABH274_RS23840 (ABH274_23830)	ftsN	4933426..4934385 (+)	960	WP_000068846.1	cell division protein FtsN	-
ABH274_RS23845 (ABH274_23835)	hslV	4934478..4935008 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABH274_RS23850 (ABH274_23840)	hslU	4935018..4936349 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABH274_RS23855 (ABH274_23845)	menA	4936416..4937342 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABH274_RS23860 (ABH274_23850)	rraA	4937435..4937920 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABH274_RS23865 (ABH274_23855)	zapB	4938005..4938250 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=903971 ABH274_RS23835 WP_000644904.1 4932309..4933334(+) (cytR) [Escherichia coli strain GABEEC132]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=903971 ABH274_RS23835 WP_000644904.1 4932309..4933334(+) (cytR) [Escherichia coli strain GABEEC132]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628