Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SCI76_RS24385 Genome accession   NZ_CP138621
Coordinates   4706733..4707683 (+) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia sp. HNGD-A6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4701733..4712683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCI76_RS24355 - 4702723..4703754 (+) 1032 WP_063247353.1 zinc-binding dehydrogenase -
  SCI76_RS24360 - 4703798..4704127 (+) 330 WP_057244395.1 hypothetical protein -
  SCI76_RS24365 - 4704460..4704624 (+) 165 WP_013057894.1 hypothetical protein -
  SCI76_RS24370 - 4704706..4704960 (-) 255 WP_013057893.1 hypothetical protein -
  SCI76_RS24375 - 4705323..4706129 (+) 807 WP_048018930.1 cell wall hydrolase -
  SCI76_RS24380 - 4706368..4706502 (+) 135 WP_255219778.1 hypothetical protein -
  SCI76_RS24385 ceuB 4706733..4707683 (+) 951 WP_028414467.1 ABC transporter permease Machinery gene
  SCI76_RS24390 - 4707676..4708623 (+) 948 WP_328175040.1 iron chelate uptake ABC transporter family permease subunit -
  SCI76_RS24395 - 4708617..4709375 (+) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  SCI76_RS24400 - 4709399..4710355 (+) 957 WP_033580631.1 siderophore ABC transporter substrate-binding protein -
  SCI76_RS24405 - 4710673..4711527 (+) 855 WP_013057886.1 manganese catalase family protein -
  SCI76_RS24410 - 4711781..4711921 (+) 141 WP_176343797.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=903702 SCI76_RS24385 WP_028414467.1 4706733..4707683(+) (ceuB) [Priestia sp. HNGD-A6]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=903702 SCI76_RS24385 WP_028414467.1 4706733..4707683(+) (ceuB) [Priestia sp. HNGD-A6]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497