Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   SCI76_RS21185 Genome accession   NZ_CP138621
Coordinates   4152269..4152709 (-) Length   146 a.a.
NCBI ID   WP_033579940.1    Uniprot ID   A0A806UCC3
Organism   Priestia sp. HNGD-A6     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 4147269..4157709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCI76_RS21160 - 4147407..4147922 (+) 516 WP_033579937.1 enoyl-CoA hydratase/isomerase family protein -
  SCI76_RS21165 - 4148062..4148187 (+) 126 WP_016765178.1 hypothetical protein -
  SCI76_RS21170 helD 4148431..4150749 (+) 2319 WP_048019965.1 RNA polymerase recycling motor HelD -
  SCI76_RS21175 - 4151134..4151724 (+) 591 WP_255902898.1 CPBP family intramembrane glutamic endopeptidase -
  SCI76_RS21180 comJ 4151826..4152233 (-) 408 WP_033579939.1 competence protein ComJ -
  SCI76_RS21185 nucA/comI 4152269..4152709 (-) 441 WP_033579940.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  SCI76_RS21190 - 4153088..4153348 (+) 261 WP_013058561.1 metal-sensitive transcriptional regulator -
  SCI76_RS21195 - 4153505..4155454 (+) 1950 WP_047750005.1 FUSC family protein -
  SCI76_RS21200 - 4155490..4156308 (-) 819 WP_033579942.1 squalene/phytoene synthase family protein -
  SCI76_RS21205 - 4156634..4157305 (+) 672 WP_048019967.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16032.88 Da        Isoelectric Point: 4.4411

>NTDB_id=903694 SCI76_RS21185 WP_033579940.1 4152269..4152709(-) (nucA/comI) [Priestia sp. HNGD-A6]
MSTYGKKLMASLFIIIACVLGFIGHAAFLAPEKTEAEVNYDATLYFPLDRYPETGDHIRDAIAAGHSSVCTIDRDGAEAN
REESLKGYPTKTGYDRDEWPMAMCEEGGAGADIRYISPSDNRGAGSWVGNQLEQYPDGTRVQFIVQ

Nucleotide


Download         Length: 441 bp        

>NTDB_id=903694 SCI76_RS21185 WP_033579940.1 4152269..4152709(-) (nucA/comI) [Priestia sp. HNGD-A6]
ATGAGTACATACGGGAAAAAATTAATGGCAAGTCTATTCATTATCATTGCATGCGTTTTAGGGTTTATAGGACATGCAGC
GTTTTTAGCTCCTGAAAAAACGGAAGCCGAAGTAAACTATGATGCAACGCTTTATTTTCCACTGGACCGATATCCTGAAA
CGGGTGATCATATTCGCGACGCGATTGCCGCTGGTCACTCTTCCGTTTGCACAATTGATCGCGACGGTGCTGAAGCGAAT
CGGGAAGAATCGCTGAAAGGATACCCAACAAAAACAGGATATGACCGCGACGAATGGCCAATGGCTATGTGCGAAGAAGG
CGGAGCGGGAGCTGATATTCGCTATATTTCACCTTCTGATAACCGCGGAGCGGGCTCATGGGTTGGAAATCAATTAGAAC
AATACCCAGATGGTACACGCGTACAATTTATCGTGCAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(52-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A806UCC3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

65.079

86.301

0.562