Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   SGN29_RS13030 Genome accession   NZ_CP138576
Coordinates   2628826..2629713 (-) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MFDS1022333     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2623826..2634713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGN29_RS13000 - 2623844..2623936 (+) 93 WP_010956583.1 hypothetical protein -
  SGN29_RS13005 - 2624044..2624541 (-) 498 WP_001065268.1 glutathione peroxidase -
  SGN29_RS13010 - 2624551..2624811 (-) 261 WP_001791974.1 hypothetical protein -
  SGN29_RS13015 - 2625193..2625306 (-) 114 WP_072384844.1 hypothetical protein -
  SGN29_RS13020 - 2625965..2627965 (-) 2001 WP_045178208.1 ABC transporter permease -
  SGN29_RS13025 - 2627962..2628717 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  SGN29_RS13030 braS 2628826..2629713 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SGN29_RS13035 braR 2629724..2630389 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SGN29_RS13040 - 2630415..2630615 (-) 201 WP_000604727.1 hypothetical protein -
  SGN29_RS13045 - 2630813..2632237 (+) 1425 WP_000953748.1 alkaline phosphatase -
  SGN29_RS13050 - 2632297..2632398 (-) 102 WP_000731976.1 SE2200 family small protein -
  SGN29_RS13055 - 2632520..2632975 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SGN29_RS13060 - 2633220..2633981 (-) 762 WP_000323446.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=903612 SGN29_RS13030 WP_000143426.1 2628826..2629713(-) (braS) [Staphylococcus aureus strain MFDS1022333]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=903612 SGN29_RS13030 WP_000143426.1 2628826..2629713(-) (braS) [Staphylococcus aureus strain MFDS1022333]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997