Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SHN03_RS13920 Genome accession   NZ_CP138566
Coordinates   2794188..2794853 (-) Length   221 a.a.
NCBI ID   WP_000697882.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AUSMDU00020487     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2789188..2799853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SHN03_RS13900 - 2789643..2789756 (-) 114 WP_078065515.1 hypothetical protein -
  SHN03_RS13905 - 2790431..2792431 (-) 2001 WP_000776728.1 ABC transporter permease -
  SHN03_RS13910 - 2792428..2793182 (-) 755 Protein_2702 ABC transporter ATP-binding protein -
  SHN03_RS13915 braS 2793290..2794177 (-) 888 WP_000143414.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SHN03_RS13920 braR 2794188..2794853 (-) 666 WP_000697882.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SHN03_RS13925 - 2794879..2795079 (-) 201 WP_000604724.1 hypothetical protein -
  SHN03_RS13930 - 2795277..2796701 (+) 1425 WP_031874997.1 alkaline phosphatase -
  SHN03_RS14620 - 2796761..2796862 (-) 102 WP_000731972.1 SE2200 family small protein -
  SHN03_RS13940 - 2796984..2797439 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SHN03_RS13945 - 2797683..2798444 (-) 762 WP_000323454.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25392.47 Da        Isoelectric Point: 4.7893

>NTDB_id=903504 SHN03_RS13920 WP_000697882.1 2794188..2794853(-) (braR) [Staphylococcus aureus strain AUSMDU00020487]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQDQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=903504 SHN03_RS13920 WP_000697882.1 2794188..2794853(-) (braR) [Staphylococcus aureus strain AUSMDU00020487]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGACCAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTGTTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGTCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

98.643

100

0.986