Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RZE77_RS23745 Genome accession   NZ_CP138513
Coordinates   5066216..5066614 (-) Length   132 a.a.
NCBI ID   WP_015867390.1    Uniprot ID   A0A3P3EQ97
Organism   Variovorax paradoxus strain SPNA7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5061216..5071614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZE77_RS23730 (RZE77_23730) - 5062948..5065254 (-) 2307 WP_319439536.1 methyl-accepting chemotaxis protein -
  RZE77_RS23735 (RZE77_23735) - 5065297..5065830 (-) 534 WP_124958691.1 chemotaxis protein CheW -
  RZE77_RS23740 (RZE77_23740) - 5065850..5066215 (-) 366 WP_015867389.1 response regulator -
  RZE77_RS23745 (RZE77_23745) pilG 5066216..5066614 (-) 399 WP_015867390.1 response regulator Regulator
  RZE77_RS23750 (RZE77_23750) - 5066696..5066866 (-) 171 WP_007838397.1 rubredoxin -
  RZE77_RS23755 (RZE77_23755) - 5066978..5067943 (+) 966 WP_319439537.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  RZE77_RS23760 (RZE77_23760) hemL 5067943..5069238 (+) 1296 WP_319439538.1 glutamate-1-semialdehyde 2,1-aminomutase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14708.85 Da        Isoelectric Point: 7.3215

>NTDB_id=903270 RZE77_RS23745 WP_015867390.1 5066216..5066614(-) (pilG) [Variovorax paradoxus strain SPNA7]
MGPNGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNAHFS
NVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGTLQQEVQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=903270 RZE77_RS23745 WP_015867390.1 5066216..5066614(-) (pilG) [Variovorax paradoxus strain SPNA7]
ATGGGGCCGAATGGATCAGGTTACAAGGTGCTCGTCATCGACGACAGCAATACGATCCGGCGCAGTGCCGAAATATTTCT
GAAGCAGGGCGGACACGAGGTTCTTCTCGCGGAAGACGGCTTCGACGCGCTCTCCAAGGTTAACGACCACAAGCCGCATC
TGATTTTCTGCGACATCCTGATGCCGCGGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCTCATTTCTCC
AATGTTCCGGTCGTGATGCTCTCTTCCAAGGACGGCGTCTTTGACAAGGCTCGCGGCCGCATGGTCGGGTCGCAAGACTA
CCTGACCAAACCTTTCACCAAAGACCAGCTGCTGCAGGCCGTGCAGCAGTTTGGCACCCTTCAACAGGAAGTGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3P3EQ97

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.281

86.364

0.538