Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RZE79_RS26325 Genome accession   NZ_CP138496
Coordinates   5600814..5601212 (-) Length   132 a.a.
NCBI ID   WP_099792921.1    Uniprot ID   A0A2G6WX73
Organism   Variovorax sp. EBFNA2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5595814..5606212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZE79_RS26310 (RZE79_26310) - 5597520..5599853 (-) 2334 WP_319357486.1 methyl-accepting chemotaxis protein -
  RZE79_RS26315 (RZE79_26315) - 5599896..5600429 (-) 534 WP_101490349.1 chemotaxis protein CheW -
  RZE79_RS26320 (RZE79_26320) - 5600449..5600814 (-) 366 WP_099792919.1 PleD family two-component system response regulator -
  RZE79_RS26325 (RZE79_26325) pilG 5600814..5601212 (-) 399 WP_099792921.1 PleD family two-component system response regulator Regulator
  RZE79_RS26330 (RZE79_26330) - 5601296..5601466 (-) 171 WP_099792923.1 rubredoxin -
  RZE79_RS26335 (RZE79_26335) - 5601578..5602540 (+) 963 WP_319357487.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  RZE79_RS26340 (RZE79_26340) hemL 5602544..5603824 (+) 1281 WP_319357488.1 glutamate-1-semialdehyde 2,1-aminomutase -
  RZE79_RS26345 (RZE79_26345) - 5603841..5605241 (-) 1401 WP_319357489.1 amidase family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14736.90 Da        Isoelectric Point: 7.3215

>NTDB_id=903162 RZE79_RS26325 WP_099792921.1 5600814..5601212(-) (pilG) [Variovorax sp. EBFNA2]
MSPNGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNAHFS
NVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGIVQQEVQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=903162 RZE79_RS26325 WP_099792921.1 5600814..5601212(-) (pilG) [Variovorax sp. EBFNA2]
ATGAGCCCGAATGGATCTGGTTACAAGGTGCTGGTCATCGATGACAGCAACACCATCCGGCGCAGTGCCGAGATTTTTTT
GAAGCAGGGTGGGCACGAGGTTCTTCTCGCGGAAGACGGCTTCGACGCGCTCTCCAAGGTTAACGACCACAAGCCTCACC
TGATTTTCTGCGACATCCTGATGCCTCGTCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAACGCACATTTCTCC
AATGTCCCGGTCGTCATGCTGTCTTCGAAAGACGGCGTGTTCGACAAGGCCCGTGGCCGCATGGTCGGGTCCCAGGACTA
TCTCACCAAGCCGTTCACCAAAGACCAGCTGCTGCAGGCCGTGCAGCAGTTTGGCATTGTTCAACAGGAAGTGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G6WX73

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.281

86.364

0.538