Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   LPC25_RS13665 Genome accession   NZ_AP025176
Coordinates   2731891..2732778 (-) Length   295 a.a.
NCBI ID   WP_000143420.1    Uniprot ID   A0A2S6DP21
Organism   Staphylococcus aureus strain TPS5614     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2726891..2737778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPC25_RS13635 - 2726909..2726997 (+) 89 Protein_2655 hypothetical protein -
  LPC25_RS13640 (TPS5614TP_25640) - 2727105..2727602 (-) 498 WP_101244946.1 glutathione peroxidase -
  LPC25_RS13645 (TPS5614TP_25650) - 2727612..2727872 (-) 261 WP_072434822.1 hypothetical protein -
  LPC25_RS13650 - 2728254..2728367 (-) 114 WP_072384844.1 hypothetical protein -
  LPC25_RS13655 (TPS5614TP_25660) - 2729031..2731031 (-) 2001 WP_000776746.1 ABC transporter permease -
  LPC25_RS13660 (TPS5614TP_25670) - 2731028..2731783 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  LPC25_RS13665 (TPS5614TP_25680) braS 2731891..2732778 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  LPC25_RS13670 (TPS5614TP_25690) braR 2732789..2733454 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  LPC25_RS13675 (TPS5614TP_25700) - 2733480..2733680 (-) 201 WP_000604723.1 hypothetical protein -
  LPC25_RS13680 (TPS5614TP_25710) - 2733878..2735227 (+) 1350 WP_000953732.1 alkaline phosphatase -
  LPC25_RS14205 - 2735287..2735388 (-) 102 WP_000731972.1 SE2200 family small protein -
  LPC25_RS13690 (TPS5614TP_25720) - 2735510..2735965 (-) 456 WP_000106184.1 MarR family winged helix-turn-helix transcriptional regulator -
  LPC25_RS13695 (TPS5614TP_25730) - 2736211..2736972 (-) 762 WP_000323451.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34045.32 Da        Isoelectric Point: 5.8962

>NTDB_id=90299 LPC25_RS13665 WP_000143420.1 2731891..2732778(-) (braS) [Staphylococcus aureus strain TPS5614]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=90299 LPC25_RS13665 WP_000143420.1 2731891..2732778(-) (braS) [Staphylococcus aureus strain TPS5614]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATATGTAAAAGATAATGGTATCGGTATTAGTGAGGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2S6DP21

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993


Multiple sequence alignment