Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   SE691_RS08175 Genome accession   NZ_CP138440
Coordinates   1713590..1714216 (+) Length   208 a.a.
NCBI ID   WP_013097255.1    Uniprot ID   A0A427KI93
Organism   Enterobacter cloacae strain 53EVA     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1708590..1719216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE691_RS08155 - 1708990..1710750 (-) 1761 WP_040021614.1 Lon protease family protein -
  SE691_RS08160 matP 1710937..1711389 (+) 453 WP_013097258.1 macrodomain Ter protein MatP -
  SE691_RS08165 ompA 1711453..1712508 (-) 1056 WP_044158562.1 porin OmpA -
  SE691_RS08170 sulA 1712863..1713372 (-) 510 WP_013097256.1 SOS-induced cell division inhibitor SulA -
  SE691_RS08175 sxy/tfoX 1713590..1714216 (+) 627 WP_013097255.1 TfoX/Sxy family DNA transformation protein Regulator
  SE691_RS08180 yccS 1714173..1716335 (-) 2163 WP_319078025.1 YccS family putative transporter -
  SE691_RS08185 - 1716355..1716801 (-) 447 WP_058681830.1 YccF domain-containing protein -
  SE691_RS08190 helD 1716924..1718978 (+) 2055 WP_038985577.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24000.57 Da        Isoelectric Point: 9.2254

>NTDB_id=902817 SE691_RS08175 WP_013097255.1 1713590..1714216(+) (sxy/tfoX) [Enterobacter cloacae strain 53EVA]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYCVKNGSSFLTLMKRGRPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=902817 SE691_RS08175 WP_013097255.1 1713590..1714216(+) (sxy/tfoX) [Enterobacter cloacae strain 53EVA]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTGGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAGGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCGAAGTACTGTGTAAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGCCGGCCGATCCTTCTCAAC
TATTATCGTGTGGATGACGGTCTCTGGCAGGACAGGGAGCGGCTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATCCAGCGCTACCAGCGAAACCGGCTAAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTGCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAAAAT
AAAGCGCTCAGTATCAAAGTACTGTTTGCCCTGGAAGGGGCGATTGAAGGCCTGCATGAAGCGGCACTCCCGGCGGAAAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A427KI93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567