Detailed information NTG0902800

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABH549_RS26995
• Genome accession: NZ_CP157165
• Coordinates: 5325787..5326812 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTAK-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5320787..5331812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH549_RS26985 (ABH549_26975)	rpmE	5323018..5323230 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABH549_RS26990 (ABH549_26980)	priA	5323433..5325631 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
ABH549_RS26995 (ABH549_26985)	cytR	5325787..5326812 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABH549_RS27000 (ABH549_26990)	ftsN	5326904..5327863 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABH549_RS27005 (ABH549_26995)	hslV	5327956..5328486 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABH549_RS27010 (ABH549_27000)	hslU	5328496..5329827 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABH549_RS27015 (ABH549_27005)	menA	5329894..5330820 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABH549_RS27020 (ABH549_27010)	rraA	5330913..5331398 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABH549_RS27025 (ABH549_27015)	zapB	5331483..5331728 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=902800 ABH549_RS26995 WP_000644904.1 5325787..5326812(+) (cytR) [Escherichia coli strain UTAK-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=902800 ABH549_RS26995 WP_000644904.1 5325787..5326812(+) (cytR) [Escherichia coli strain UTAK-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628