Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SE336_RS14900 Genome accession   NZ_CP138376
Coordinates   3501361..3501762 (-) Length   133 a.a.
NCBI ID   WP_024711139.1    Uniprot ID   A0A855JH23
Organism   Xanthomonas arboricola strain AHX463     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3496361..3506762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE336_RS14885 (SE336_14895) - 3498375..3500411 (-) 2037 WP_415916200.1 methyl-accepting chemotaxis protein -
  SE336_RS14890 (SE336_14900) - 3500451..3500981 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  SE336_RS14895 (SE336_14905) - 3500981..3501343 (-) 363 WP_024940328.1 response regulator -
  SE336_RS14900 (SE336_14910) pilG 3501361..3501762 (-) 402 WP_024711139.1 twitching motility response regulator PilG Regulator
  SE336_RS14905 (SE336_14915) gshB 3502001..3502951 (+) 951 WP_415916201.1 glutathione synthase -
  SE336_RS14910 (SE336_14920) - 3502948..3503823 (+) 876 WP_039519592.1 energy transducer TonB -
  SE336_RS14915 (SE336_14925) - 3503909..3504823 (-) 915 WP_415916202.1 ADP-ribosylglycohydrolase family protein -
  SE336_RS14920 (SE336_14930) tsaB 3504820..3505539 (-) 720 WP_415916203.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14681.06 Da        Isoelectric Point: 6.9539

>NTDB_id=902512 SE336_RS14900 WP_024711139.1 3501361..3501762(-) (pilG) [Xanthomonas arboricola strain AHX463]
MTENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=902512 SE336_RS14900 WP_024711139.1 3501361..3501762(-) (pilG) [Xanthomonas arboricola strain AHX463]
ATGACTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGCTGTGAAGTAGTGACAGCAACCGATGGTTTCGAGGCACTGGCCAAGATTG
CCGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCGTTCACACGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A855JH23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684