Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SE337_RS25510 Genome accession   NZ_CP138374
Coordinates   5492180..5492590 (-) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas amygdali pv. sesami strain DFR141     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5487180..5497590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE337_RS25495 (SE337_25350) - 5489113..5491155 (-) 2043 WP_002551741.1 methyl-accepting chemotaxis protein -
  SE337_RS25500 (SE337_25355) - 5491214..5491753 (-) 540 WP_002551740.1 chemotaxis protein CheW -
  SE337_RS25505 (SE337_25360) pilH 5491768..5492133 (-) 366 WP_002551739.1 twitching motility response regulator PilH -
  SE337_RS25510 (SE337_25365) pilG 5492180..5492590 (-) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  SE337_RS25515 (SE337_25370) gshB 5492835..5493794 (+) 960 WP_054077082.1 glutathione synthase -
  SE337_RS25520 (SE337_25375) - 5493951..5494853 (+) 903 WP_054077081.1 energy transducer TonB -
  SE337_RS25525 (SE337_25380) - 5494929..5495501 (+) 573 WP_002551735.1 YqgE/AlgH family protein -
  SE337_RS25530 (SE337_25385) ruvX 5495501..5495941 (+) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  SE337_RS25535 (SE337_25390) pyrR 5496040..5496552 (+) 513 WP_002551733.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  SE337_RS25540 (SE337_25395) - 5496565..5497569 (+) 1005 WP_004666454.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=902495 SE337_RS25510 WP_002551738.1 5492180..5492590(-) (pilG) [Pseudomonas amygdali pv. sesami strain DFR141]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=902495 SE337_RS25510 WP_002551738.1 5492180..5492590(-) (pilG) [Pseudomonas amygdali pv. sesami strain DFR141]
ATGGAACAACACGCCTCCGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACCATTCGCCGCACCGCCGAAACGCTGCT
TAAAAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCACGAA
TCATATTCGTAGATATCATGATGCCGCGTCTGGACGGTTATCAGACGTGTGCGCTGATCAAGAACAACCGCGCATTCAAG
TCCACGCCGGTCATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACAAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691