Detailed information NTG0902486

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABH552_RS22730
• Genome accession: NZ_CP157152
• Coordinates: 4655247..4656272 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTAK-5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4650247..4661272

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH552_RS22720 (ABH552_22715)	rpmE	4652478..4652690 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABH552_RS22725 (ABH552_22720)	priA	4652893..4655091 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
ABH552_RS22730 (ABH552_22725)	cytR	4655247..4656272 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABH552_RS22735 (ABH552_22730)	ftsN	4656364..4657323 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABH552_RS22740 (ABH552_22735)	hslV	4657416..4657946 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABH552_RS22745 (ABH552_22740)	hslU	4657956..4659287 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABH552_RS22750 (ABH552_22745)	menA	4659354..4660280 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABH552_RS22755 (ABH552_22750)	rraA	4660373..4660858 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABH552_RS22760 (ABH552_22755)	zapB	4660943..4661188 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=902486 ABH552_RS22730 WP_000644904.1 4655247..4656272(+) (cytR) [Escherichia coli strain UTAK-5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=902486 ABH552_RS22730 WP_000644904.1 4655247..4656272(+) (cytR) [Escherichia coli strain UTAK-5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628