Detailed information NTG0902330

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABH542_RS22620
• Genome accession: NZ_CP157132
• Coordinates: 4627330..4628355 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTAK-18
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4622330..4633355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH542_RS22610 (ABH542_22595)	rpmE	4624560..4624773 (-)	214	Protein_4415	50S ribosomal protein L31	-
ABH542_RS22615 (ABH542_22600)	priA	4624976..4627174 (+)	2199	WP_001348093.1	primosomal protein N'	Machinery gene
ABH542_RS22620 (ABH542_22605)	cytR	4627330..4628355 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABH542_RS22625 (ABH542_22610)	ftsN	4628447..4629406 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABH542_RS22630 (ABH542_22615)	hslV	4629499..4630029 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABH542_RS22635 (ABH542_22620)	hslU	4630039..4631370 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABH542_RS22640 (ABH542_22625)	menA	4631437..4632363 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABH542_RS22645 (ABH542_22630)	rraA	4632456..4632941 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABH542_RS22650 (ABH542_22635)	zapB	4633026..4633271 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=902330 ABH542_RS22620 WP_000644904.1 4627330..4628355(+) (cytR) [Escherichia coli strain UTAK-18]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=902330 ABH542_RS22620 WP_000644904.1 4627330..4628355(+) (cytR) [Escherichia coli strain UTAK-18]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628