Detailed information NTG0902253

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABH548_RS22530
• Genome accession: NZ_CP157115
• Coordinates: 4619917..4620942 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTME-8
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4614917..4625942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH548_RS22520 (ABH548_22495)	rpmE	4617148..4617360 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABH548_RS22525 (ABH548_22500)	priA	4617563..4619761 (+)	2199	WP_042031300.1	primosomal protein N'	Machinery gene
ABH548_RS22530 (ABH548_22505)	cytR	4619917..4620942 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABH548_RS22535 (ABH548_22510)	ftsN	4621034..4621993 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABH548_RS22540 (ABH548_22515)	hslV	4622086..4622616 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABH548_RS22545 (ABH548_22520)	hslU	4622626..4623957 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABH548_RS22550 (ABH548_22525)	menA	4624024..4624950 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABH548_RS22555 (ABH548_22530)	rraA	4625043..4625528 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABH548_RS22560 (ABH548_22535)	zapB	4625613..4625858 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=902253 ABH548_RS22530 WP_000644904.1 4619917..4620942(+) (cytR) [Escherichia coli strain UTME-8]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=902253 ABH548_RS22530 WP_000644904.1 4619917..4620942(+) (cytR) [Escherichia coli strain UTME-8]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628