Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   SE117_RS13500 Genome accession   NZ_CP138363
Coordinates   2716839..2717726 (-) Length   295 a.a.
NCBI ID   WP_000143412.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 15V8707     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2711839..2722726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE117_RS13470 (SE117_13470) - 2711853..2711945 (+) 93 WP_010956583.1 hypothetical protein -
  SE117_RS13475 (SE117_13475) - 2712053..2712550 (-) 498 WP_001065267.1 glutathione peroxidase -
  SE117_RS13480 (SE117_13480) - 2712560..2712820 (-) 261 WP_319097954.1 hypothetical protein -
  SE117_RS13485 (SE117_13485) - 2713202..2713315 (-) 114 WP_072357681.1 hypothetical protein -
  SE117_RS13490 (SE117_13490) - 2713979..2715979 (-) 2001 WP_000776730.1 ABC transporter permease -
  SE117_RS13495 (SE117_13495) - 2715976..2716731 (-) 756 WP_000923767.1 ABC transporter ATP-binding protein -
  SE117_RS13500 (SE117_13500) braS 2716839..2717726 (-) 888 WP_000143412.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SE117_RS13505 (SE117_13505) braR 2717737..2718402 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SE117_RS13510 (SE117_13510) - 2718428..2718628 (-) 201 WP_000604725.1 hypothetical protein -
  SE117_RS13515 (SE117_13515) - 2718826..2720250 (+) 1425 WP_000948997.1 alkaline phosphatase -
  SE117_RS14030 - 2720310..2720411 (-) 102 WP_000731972.1 SE2200 family small protein -
  SE117_RS13525 (SE117_13525) - 2720533..2720988 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SE117_RS13530 (SE117_13530) - 2721233..2721994 (-) 762 WP_319097958.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34059.34 Da        Isoelectric Point: 5.8962

>NTDB_id=902222 SE117_RS13500 WP_000143412.1 2716839..2717726(-) (braS) [Staphylococcus aureus strain 15V8707]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFLKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=902222 SE117_RS13500 WP_000143412.1 2716839..2717726(-) (braS) [Staphylococcus aureus strain 15V8707]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTTATAGGTATTAAAT
ATTTAAGTTTTTTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99