Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | SE147_RS02340 | Genome accession | NZ_CP138342 |
| Coordinates | 450218..451147 (+) | Length | 309 a.a. |
| NCBI ID | WP_250328390.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain TH1713 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 445218..456147
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SE147_RS02315 (SE147_02315) | - | 445868..446377 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| SE147_RS02320 (SE147_02320) | - | 446607..447188 (-) | 582 | WP_033910016.1 | superoxide dismutase | - |
| SE147_RS02325 (SE147_02325) | dnaB | 447352..448758 (+) | 1407 | WP_123771571.1 | replicative DNA helicase | - |
| SE147_RS02330 (SE147_02330) | pilH | 448913..449578 (+) | 666 | WP_319078477.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| SE147_RS02335 (SE147_02335) | pilV | 449610..450221 (+) | 612 | WP_250328389.1 | type IV pilus modification protein PilV | Machinery gene |
| SE147_RS02340 (SE147_02340) | pilJ | 450218..451147 (+) | 930 | WP_250328390.1 | PilW family protein | Machinery gene |
| SE147_RS02345 (SE147_02345) | pilK | 451126..451737 (+) | 612 | WP_123768185.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| SE147_RS02350 (SE147_02350) | pilL | 451739..452212 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| SE147_RS02355 (SE147_02355) | - | 452282..452590 (-) | 309 | WP_025456241.1 | AzlD family protein | - |
| SE147_RS02360 (SE147_02360) | - | 452587..453296 (-) | 710 | Protein_458 | AzlC family ABC transporter permease | - |
| SE147_RS02365 (SE147_02365) | dut | 453462..453914 (+) | 453 | WP_003687923.1 | dUTP diphosphatase | - |
| SE147_RS02370 (SE147_02370) | dapC | 453992..455179 (+) | 1188 | WP_123771553.1 | succinyldiaminopimelate transaminase | - |
| SE147_RS02375 (SE147_02375) | yaaA | 455335..456114 (+) | 780 | WP_047917077.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 309 a.a. Molecular weight: 33921.87 Da Isoelectric Point: 9.3367
>NTDB_id=901965 SE147_RS02340 WP_250328390.1 450218..451147(+) (pilJ) [Neisseria gonorrhoeae strain TH1713]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVPQKNYLFSLKKSNANKLIPIAESPNINYQNFFQVSSALIFQYGIDDVNASDATTVVSSCAAISK
PGKQIPTLEDAKKELKIVSQDKEQGNIARQRHVVNAYAVGKIAGEGGLFRFQLDDKGKWGNPQLLVKKVKRMKVRYIYVS
GCPEDEDVGKEEQFKYTDKFDGSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVPQKNYLFSLKKSNANKLIPIAESPNINYQNFFQVSSALIFQYGIDDVNASDATTVVSSCAAISK
PGKQIPTLEDAKKELKIVSQDKEQGNIARQRHVVNAYAVGKIAGEGGLFRFQLDDKGKWGNPQLLVKKVKRMKVRYIYVS
GCPEDEDVGKEEQFKYTDKFDGSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 930 bp
>NTDB_id=901965 SE147_RS02340 WP_250328390.1 450218..451147(+) (pilJ) [Neisseria gonorrhoeae strain TH1713]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGCCGCAAAAAAACTATCTTTTTTCCTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTCCAAATATCAATTATCAGAATTTTTTCCAGGTTAGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGACGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGTGAGTCAGGATAAGGAGCAAGGCAATAT
AGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGGAGGTTTGTTCCGCTTCCAATTGG
ATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTGAAAAAGGTTAAACGTATGAAAGTGCGGTATATCTATGTTTCC
GGTTGTCCTGAAGATGAAGATGTCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACGGCTCTGTTACGCCTGC
CGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACCGTA
TCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGCCGCAAAAAAACTATCTTTTTTCCTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTCCAAATATCAATTATCAGAATTTTTTCCAGGTTAGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGACGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGTGAGTCAGGATAAGGAGCAAGGCAATAT
AGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGGAGGTTTGTTCCGCTTCCAATTGG
ATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTGAAAAAGGTTAAACGTATGAAAGTGCGGTATATCTATGTTTCC
GGTTGTCCTGAAGATGAAGATGTCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACGGCTCTGTTACGCCTGC
CGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACCGTA
TCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
90.735 |
100 |
0.919 |