Detailed information NTG0090195

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ANFP_RS13660
• Genome accession: NZ_AP025160
• Coordinates: 2672740..2673771 (-)
• Length: 343 a.a.
• NCBI ID: WP_009568264.1
• Uniprot ID: A0A2W1KN79
• Organism: Acidithiobacillus ferrooxidans strain NFP31
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2667740..2678771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ANFP_RS13630 (ANFP_27400)	hslV	2667950..2668489 (+)	540	WP_009565976.1	ATP-dependent protease subunit HslV	-
ANFP_RS13635 (ANFP_27410)	hslU	2668492..2669814 (+)	1323	WP_012537366.1	ATP-dependent protease ATPase subunit HslU	-
ANFP_RS13640 (ANFP_27420)	-	2669837..2670169 (-)	333	WP_009568269.1	hypothetical protein	-
ANFP_RS13645 (ANFP_27430)	rpoH	2670166..2671026 (-)	861	WP_012537367.1	RNA polymerase sigma factor RpoH	-
ANFP_RS13650 (ANFP_27450)	ftsX	2671170..2672075 (-)	906	WP_009568267.1	permease-like cell division protein FtsX	-
ANFP_RS13655 (ANFP_27460)	ftsE	2672072..2672743 (-)	672	WP_009568266.1	cell division ATP-binding protein FtsE	-
ANFP_RS13660 (ANFP_27470)	pilA	2672740..2673771 (-)	1032	WP_009568264.1	signal recognition particle-docking protein FtsY	Machinery gene
ANFP_RS13665 (ANFP_27480)	rsmD	2673894..2674463 (+)	570	WP_009568262.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ANFP_RS13670 (ANFP_27490)	coaD	2674456..2674980 (+)	525	WP_012537368.1	pantetheine-phosphate adenylyltransferase	-
ANFP_RS13675 (ANFP_27500)	-	2675009..2675260 (+)	252	WP_012537369.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ANFP_RS13680 (ANFP_27510)	-	2675244..2677223 (-)	1980	WP_012537370.1	dynamin family protein	-
ANFP_RS13685 (ANFP_27520)	mutM	2677240..2678052 (-)	813	WP_009567582.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 36809.09 Da
• Isoelectric Point: 6.8862

>NTDB_id=90195 ANFP_RS13660 WP_009568264.1 2672740..2673771(-) (pilA) [Acidithiobacillus ferrooxidans strain NFP31]
MVFDWFKRNKSLPAGETFAEEVNSPATVATIPEDTPKGLFSRLRQGLARSREQLAGGVGRLVLGKKVIDADLLEELEALL
LQADLGSAATREVMDSVTERVRRNELTDPAALQAALRESLLDILRPRAQPWSPEKGHSQVLLMVGINGAGKTTTIGKLAA
RWKAEGFTVVLAAGDTFRAAAVEQLQGWGRRAQVPVVAQGTGADSASVIFDALTTTRARGSDLLIADTAGRLHTQGHLME
ELKKIRRVLGKQDPEAPQQIWLVLDAGTGQNALNQARQFHDAVGLTGICITKLDGTAKGGVVAAIAKALPIPIRYIGVGE
QVEDLRPFDPESFVDALFAESKS

Nucleotide

• Length: 1032 bp

>NTDB_id=90195 ANFP_RS13660 WP_009568264.1 2672740..2673771(-) (pilA) [Acidithiobacillus ferrooxidans strain NFP31]
ATGGTGTTCGACTGGTTCAAGCGTAACAAAAGCCTCCCTGCGGGGGAAACGTTCGCCGAAGAGGTGAACTCCCCTGCCAC
TGTGGCGACTATCCCGGAAGATACCCCCAAGGGACTTTTCTCTCGTCTTCGGCAAGGTCTGGCCCGCAGCCGGGAACAAC
TGGCCGGGGGTGTAGGGCGTCTGGTACTTGGTAAAAAGGTTATCGATGCCGATCTGCTGGAAGAACTGGAAGCCTTGCTG
CTACAGGCGGATCTCGGCAGCGCCGCAACCCGCGAAGTCATGGACAGCGTCACGGAGCGGGTGCGTCGCAACGAACTCAC
GGACCCCGCCGCGCTCCAGGCGGCACTGCGCGAGTCGCTTCTGGATATCCTGCGTCCCCGCGCACAACCCTGGTCGCCCG
AGAAGGGGCATTCTCAGGTGTTGCTCATGGTCGGTATCAACGGCGCAGGCAAAACGACCACCATCGGTAAACTGGCGGCA
CGCTGGAAGGCGGAAGGTTTCACGGTGGTGCTTGCTGCCGGGGACACCTTCCGCGCCGCTGCCGTCGAGCAGTTGCAGGG
CTGGGGGAGGCGCGCGCAGGTGCCGGTGGTGGCTCAGGGTACGGGCGCTGACAGCGCCTCCGTGATTTTCGATGCGCTGA
CCACGACCCGCGCGCGTGGCAGCGACCTGCTCATCGCCGATACCGCCGGGCGCCTCCACACCCAAGGCCATCTCATGGAA
GAGTTGAAGAAGATCAGGCGGGTTCTCGGCAAACAGGATCCGGAGGCGCCGCAGCAGATCTGGTTGGTGCTGGACGCCGG
GACGGGGCAGAACGCCCTCAATCAGGCACGTCAGTTTCATGACGCCGTGGGGCTGACGGGTATTTGCATCACCAAGCTGG
ATGGCACCGCCAAGGGGGGCGTGGTGGCGGCCATCGCCAAGGCCCTGCCCATCCCCATTCGCTACATTGGTGTCGGTGAG
CAGGTCGAAGACTTGCGTCCCTTTGACCCCGAATCCTTTGTCGATGCCTTGTTTGCGGAGTCGAAGTCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (139-338)

• SRP54-type protein, helical bundle domain (SRP54_N) (63-120)

3D structure

• AlphaFold DB: A0A2W1KN79

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.778	94.461	0.499