Detailed information NTG0901947

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: SE146_RS11130
• Genome accession: NZ_CP138339
• Coordinates: 2110583..2111836 (+)
• Length: 417 a.a.
• NCBI ID: WP_319078437.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain TH2288
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2105583..2116836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE146_RS11110 (SE146_11095)	-	2106331..2107332 (+)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-
SE146_RS11115 (SE146_11100)	-	2107426..2108274 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
SE146_RS11120 (SE146_11105)	-	2108300..2108785 (+)	486	WP_003687001.1	CinA family protein	-
SE146_RS11125 (SE146_11110)	msrAB	2108869..2110437 (-)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
SE146_RS11130 (SE146_11115)	pilA	2110583..2111836 (+)	1254	WP_319078437.1	signal recognition particle-docking protein FtsY	Machinery gene
SE146_RS11135 (SE146_11120)	-	2112101..2112868 (-)	768	WP_319078438.1	opacity family porin	-
SE146_RS11140 (SE146_11125)	-	2113372..2113871 (-)	500	Protein_2148	pilin	-
SE146_RS11145 (SE146_11130)	-	2114240..2114383 (-)	144	WP_003691943.1	hypothetical protein	-
SE146_RS11150 (SE146_11135)	-	2114848..2115168 (-)	321	Protein_2150	pilin	-
SE146_RS11155 (SE146_11140)	-	2115134..2115586 (-)	453	Protein_2151	pilin	-
SE146_RS11160 (SE146_11145)	lpxC	2115715..2116638 (-)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44321.66 Da
• Isoelectric Point: 4.8647

>NTDB_id=901947 SE146_RS11130 WP_319078437.1 2110583..2111836(+) (pilA) [Neisseria gonorrhoeae strain TH2288]
MFSFFRRKKKQETSALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=901947 SE146_RS11130 WP_319078437.1 2110583..2111836(+) (pilA) [Neisseria gonorrhoeae strain TH2288]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGTCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998