Detailed information NTG0901932

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABH544_RS22995
• Genome accession: NZ_CP157093
• Coordinates: 4682981..4684006 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTME-13
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4677981..4689006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH544_RS22985 (ABH544_22975)	rpmE	4680211..4680424 (-)	214	Protein_4488	50S ribosomal protein L31	-
ABH544_RS22990 (ABH544_22980)	priA	4680627..4682825 (+)	2199	WP_001348093.1	primosomal protein N'	Machinery gene
ABH544_RS22995 (ABH544_22985)	cytR	4682981..4684006 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABH544_RS23000 (ABH544_22990)	ftsN	4684098..4685057 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABH544_RS23005 (ABH544_22995)	hslV	4685150..4685680 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABH544_RS23010 (ABH544_23000)	hslU	4685690..4687021 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABH544_RS23015 (ABH544_23005)	menA	4687088..4688014 (+)	927	WP_097735054.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABH544_RS23020 (ABH544_23010)	rraA	4688107..4688592 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABH544_RS23025 (ABH544_23015)	zapB	4688677..4688922 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=901932 ABH544_RS22995 WP_000644904.1 4682981..4684006(+) (cytR) [Escherichia coli strain UTME-13]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=901932 ABH544_RS22995 WP_000644904.1 4682981..4684006(+) (cytR) [Escherichia coli strain UTME-13]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628