Detailed information NTG0901400

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SC192_RS08460
• Genome accession: NZ_CP138205
• Coordinates: 1762633..1763448 (+)
• Length: 271 a.a.
• NCBI ID: WP_348897165.1
• Uniprot ID: A0AB39K1Q1
• Organism: Acinetobacter sp. 2019-01-05
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1757633..1768448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SC192_RS08425 (SC192_08435)	kdsB	1758156..1758917 (+)	762	WP_348897171.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
SC192_RS08430 (SC192_08440)	-	1758929..1759909 (+)	981	WP_348897170.1	DNA polymerase III subunit delta'	-
SC192_RS08435 (SC192_08445)	-	1759921..1760262 (+)	342	WP_348897169.1	PilZ domain-containing protein	-
SC192_RS08440 (SC192_08450)	-	1760280..1761053 (+)	774	WP_348897168.1	TatD family hydrolase	-
SC192_RS08445 (SC192_08455)	-	1761091..1761699 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
SC192_RS08450 (SC192_08460)	-	1761709..1762263 (+)	555	WP_348897167.1	type II secretion system protein	-
SC192_RS08455 (SC192_08465)	xcpV	1762253..1762633 (+)	381	WP_348897166.1	type II secretion system minor pseudopilin GspI	Machinery gene
SC192_RS08460 (SC192_08470)	xcpW	1762633..1763448 (+)	816	WP_348897165.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SC192_RS08465 (SC192_08475)	gspK	1763448..1764407 (+)	960	WP_348897164.1	type II secretion system minor pseudopilin GspK	-
SC192_RS08470 (SC192_08480)	-	1764637..1765233 (+)	597	WP_348897163.1	6-pyruvoyl trahydropterin synthase family protein	-
SC192_RS08475 (SC192_08485)	ung	1765284..1765997 (+)	714	WP_348897162.1	uracil-DNA glycosylase	-
SC192_RS08480 (SC192_08490)	-	1765994..1767118 (+)	1125	WP_348897161.1	enoyl-CoA hydratase/isomerase family protein	-
SC192_RS08485 (SC192_08495)	tadA	1767127..1767630 (+)	504	WP_348897160.1	tRNA adenosine(34) deaminase TadA	-
SC192_RS08490 (SC192_08500)	-	1767701..1768141 (+)	441	WP_348897159.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30436.76 Da
• Isoelectric Point: 9.8162

>NTDB_id=901400 SC192_RS08460 WP_348897165.1 1762633..1763448(+) (xcpW) [Acinetobacter sp. 2019-01-05]
MIKNKNVRTQDVAARLAARSDGVATNYFEHSSSSCAPTKLRFKGSHSRSIASHLAARSSSARLARASGFTLVELLVAIAI
FAILSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQYHIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQITVAGVSYEWIYSLNQGDLSLSQSGGT

Nucleotide

• Length: 816 bp

>NTDB_id=901400 SC192_RS08460 WP_348897165.1 1762633..1763448(+) (xcpW) [Acinetobacter sp. 2019-01-05]
ATGATAAAAAATAAAAATGTTCGCACTCAGGACGTAGCTGCTCGTCTTGCGGCACGATCGGATGGTGTGGCGACTAATTA
CTTCGAGCATAGCTCTTCGTCTTGCGCTCCGACAAAGCTTCGCTTTAAAGGCTCTCACTCTCGAAGCATAGCTTCTCATC
TTGCGGCACGATCGAGCAGTGCTCGATTAGCTCGTGCCTCAGGATTTACTTTAGTCGAGTTATTAGTAGCGATTGCTATC
TTTGCAATTTTATCTTTATTGGGATGGAAAATTTTCGATTATTTGCTCAAAGTACGTGATCGTAATGCTGAACATGAAGT
GCATTTATTTGAATTACAAGATGCTTATCAACAAATTCTACGAGATACATTGCAAATTATTCCCTTATCGGCAAATCAAG
GTGGACAACTTCATCCTGCTTTAGAAATTGATAATCAAATTCTGCGTTTTAGTAAGGCAGGTGTAACTGATCCTTTAAAA
CAAGGGTTATCACCATTTGAAAGAATTGAATATCGTTATGATGCAGACCAGAAAAAACTATATCGACTTAAATATAGTAA
TTTAAATACTTCGAATAGAGAGCAGCCTTTATCGAGTACGCTACTAAGTCAAGTCGAACAATATCACATTATGGTTTTGA
CTCCGCAGGAAGTAACCAAATGGCCTGAAGTGAATATTGATCCAACTAAACCCAATGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATTCAAATTACGGTGGCGGGGGTAAGTTATGAATGGATTTACAGTTTAAACCAAGGTGATTTATCACTTTCCCA
GTCAGGTGGGACATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	92.672	85.609	0.793