Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   SC192_RS03315 Genome accession   NZ_CP138205
Coordinates   675170..679675 (+) Length   1501 a.a.
NCBI ID   WP_348896115.1    Uniprot ID   A0AB39K3C5
Organism   Acinetobacter sp. 2019-01-05     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 670170..684675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SC192_RS03290 (SC192_03290) - 670609..671247 (-) 639 WP_348896118.1 hypothetical protein -
  SC192_RS03295 (SC192_03295) pilG 671530..671913 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SC192_RS03300 (SC192_03300) - 671937..672299 (+) 363 WP_009389403.1 PleD family two-component system response regulator -
  SC192_RS03305 (SC192_03305) - 672360..672896 (+) 537 WP_348896117.1 chemotaxis protein CheW -
  SC192_RS03310 (SC192_03310) - 672943..675021 (+) 2079 WP_348896116.1 methyl-accepting chemotaxis protein -
  SC192_RS03315 (SC192_03315) chpA 675170..679675 (+) 4506 WP_348896115.1 Hpt domain-containing protein Regulator
  SC192_RS03320 (SC192_03320) - 679672..680139 (+) 468 WP_348896114.1 hypothetical protein -
  SC192_RS03325 (SC192_03325) - 680336..681219 (+) 884 Protein_636 alpha/beta fold hydrolase -
  SC192_RS03330 (SC192_03330) dapE 681294..682427 (-) 1134 WP_348898213.1 succinyl-diaminopimelate desuccinylase -
  SC192_RS03335 (SC192_03335) - 682553..682696 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  SC192_RS03340 (SC192_03340) - 682825..683703 (-) 879 WP_348898212.1 DUF1853 family protein -
  SC192_RS03345 (SC192_03345) - 683808..684176 (+) 369 WP_002051275.1 YbaN family protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 170832.97 Da        Isoelectric Point: 4.3498

>NTDB_id=901395 SC192_RS03315 WP_348896115.1 675170..679675(+) (chpA) [Acinetobacter sp. 2019-01-05]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLIHEWVQSENVTTLAEIRRHFHTLKGSGRMIGAKSSA
ELAWVVEYTLNRVINQSLKLTPAIQGYVQLVFKFYFFKLVDNFKQKKAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETVTGLELDGTLQNELAEPSIQDAHTEIEINLNETLALFMEEAEEHLATINQFLEQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFIRDSLELLSHHSSNEQLEARLQQFNQSWDAYAEQ
YGDQTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRTEFPHYLERLSEQADLLLQHTQSQAMLGLHEYTSQLKESYDV
LLDKPALLQSDYVFEIYQKAHQQLIQLFDALAAGQRVGIVKQNQSILEELKLYTLYSPDLQNNLASQDASFSVEPEPEVS
VTTENSSNSVDWTALSQSVQQDRQYISSPEVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLMRYLHT
LKGGANMVQATYLGSIAHELESIYERLIQKQLVASSPLIDFIRLVQDDLADRLQLMREQQLDYAAPYTIQALKRAGQSFD
FQTVFAIETYDTEDELLPEQELISDVLIDERPVYVEPVFAKLESVQDQSTDTTVIELAMPTEINTLVAQQDNDAVIDEQD
IAAVVEQTFLEEATELLEMADVLLKQWFEKRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQLENAFEQFALHHFNS
NIYDHLLESAFVWLKDAIFKHNYQHFDGLQQSLENIQFFETTIQIPTKLTKADLFSSEPVMTFIQGDGTEPPPMMGAWEQ
TERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELESQIIAKHGIEHS
RYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRI
VRQTSSALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRIQRQQAHKPEAGRIELNIQRQGTDVVVVFS
DDGQGIDVEKVRQKALLAGLIKPEQHLEQQDILQFIFHPGLSTAEQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQG
TTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIERIIRVSPASLEQYFECPQESFEYENKRYPLRYLSEFVGNQPIPRLS
DVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTQRHKE
FSEAGYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNLV
RHHDIHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVVSESGVKS

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=901395 SC192_RS03315 WP_348896115.1 675170..679675(+) (chpA) [Acinetobacter sp. 2019-01-05]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCCGAGTTTCT
TGAGATCTTCGTAGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTAATTCATGAATGGGTGCAATCTGAGAATG
TTACTACGCTCGCTGAAATTCGCCGCCATTTTCACACCTTAAAAGGTTCTGGAAGAATGATTGGTGCTAAATCTTCAGCA
GAGCTTGCTTGGGTTGTTGAATATACGCTCAATCGGGTGATCAATCAAAGCCTTAAGTTGACTCCAGCTATTCAGGGCTA
TGTTCAGTTAGTATTTAAGTTCTATTTTTTTAAATTAGTAGATAATTTTAAGCAAAAAAAAGCACATGCTGTAGATTTTA
GACCTCTTATTTTATTAGGCCAACAATTACAACAGCAGCAAAGTCTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCTGAAACAGTAACTGGACTTGAGCTAGATGGCACCTTGCAAAATGAATTAGCTGAACCGTCTATTCA
AGATGCACATACCGAAATTGAAATAAATCTAAATGAAACCTTAGCTTTGTTTATGGAAGAGGCTGAAGAGCATTTAGCTA
CAATTAATCAGTTCTTGGAACAAGAGCTACATCAGTATGATAGCTATAATGCTTTGATTCGTGCCCTACATACTTTGCGT
GGTAGCTCTGCAATGGCGCAGGTTGAAACCATTTTTGAAGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTATTGCA
AGAAGAGCTTTCTTCCCATTCTGAAGAAATTCTACTATTACAAGAATATCGTGAGTTTATTAGAGATAGTTTAGAACTAT
TATCCCATCATAGTTCTAATGAGCAACTTGAAGCGAGATTGCAACAGTTTAATCAGTCATGGGATGCATACGCTGAGCAA
TATGGTGATCAAACAGACCCATTAATGCCTTCTCATGGTTTAGTATCTCAATTATTACAATTAGATGTTTCTGAATTACT
TGATGCAGAATTAGATTTTGAGAAGGGGATTCGTACCGAGTTTCCTCATTATCTTGAGCGTTTAAGCGAACAGGCAGATC
TGTTACTTCAACATACACAATCTCAAGCTATGCTTGGTTTGCATGAATATACAAGTCAGTTGAAAGAAAGCTATGATGTA
TTGCTTGATAAACCAGCGCTATTGCAATCGGATTATGTTTTTGAAATTTATCAAAAAGCACATCAGCAGCTCATTCAATT
ATTTGATGCATTAGCTGCTGGTCAGCGCGTAGGTATTGTTAAGCAAAATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CTTTATATAGCCCAGACCTACAAAATAATCTGGCCTCACAGGATGCTTCATTCTCTGTTGAACCAGAGCCAGAGGTAAGT
GTTACTACAGAGAATTCATCAAACTCTGTTGATTGGACAGCATTAAGTCAAAGTGTACAGCAAGATCGCCAATATATTTC
ATCTCCAGAGGTGAACCGAAACTTTGATGCTGATCTTCTAGATATCTTTCTTGAAGAAGCAGAAGAATTACTTGAAGGAA
TTGATACTGATCTCAATATTTGGGTCGGCGAACAAGAAAACTTTGCTGCTCTGAACAACCTGATGCGCTATTTGCATACC
TTAAAAGGTGGCGCAAATATGGTTCAGGCCACTTATCTTGGTTCAATTGCGCATGAGTTAGAAAGTATTTATGAACGTCT
AATTCAAAAGCAATTGGTTGCATCTTCACCTTTAATTGATTTTATCCGTTTGGTGCAAGATGACTTGGCTGACCGTTTGC
AACTTATGCGCGAACAACAGTTAGATTATGCCGCACCTTATACAATTCAAGCGTTGAAGCGAGCTGGCCAAAGCTTTGAT
TTCCAAACTGTATTTGCAATTGAAACTTATGATACTGAAGATGAGCTACTTCCTGAGCAGGAATTAATATCTGATGTATT
AATAGATGAAAGACCGGTATACGTTGAACCAGTTTTTGCAAAATTAGAAAGCGTACAAGATCAGTCGACTGATACAACCG
TTATTGAGTTGGCTATGCCGACGGAAATTAATACATTGGTTGCACAGCAAGACAATGATGCAGTAATTGATGAGCAAGAT
ATTGCGGCTGTTGTTGAGCAGACATTCTTAGAAGAAGCTACTGAATTGTTAGAGATGGCTGATGTGCTATTGAAACAGTG
GTTTGAAAAACGGACAAACCGTAGTATTTTGCTTCAACTACAAAGAGCCGTGCACAGTTTGAAGGGTGGTGCACGAATGG
TTGGCTTAGAAGCCGTACAAGCCATCGCTTACCAACTAGAGAATGCTTTTGAACAATTTGCACTTCATCACTTCAATTCT
AATATTTATGATCATTTATTAGAAAGTGCGTTTGTATGGTTAAAAGATGCAATCTTTAAGCACAACTACCAACATTTCGA
TGGATTGCAACAAAGCTTAGAAAATATTCAATTCTTTGAAACCACAATTCAAATTCCGACTAAGTTGACGAAAGCCGACT
TGTTTAGCTCAGAACCAGTGATGACCTTTATACAAGGTGATGGTACAGAACCACCACCAATGATGGGGGCATGGGAGCAA
ACAGAACGTCTGGATCAGAATAATGAAATGATTCGTGTTTCAGCGGACTTAATTGAGAAGATGATTGATTTGTCTGGTGA
AAACTCGATTAACCGTTCACGAATTGAAATGGATTTAAGTCAGTTTGGCCATACACTGGTTGAGATGGAACTGGCAATTC
AACGACTTGCCGATCAGTTGCGTCGAATGGAAGGTGAGCTAGAATCACAAATTATTGCTAAACATGGTATTGAGCATTCT
CGTTATACTGATTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAATTATCAAAATCTCTTGCTGAATCCGC
ATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAGATCAGGGATACTGAAAGTCTGCTTTTACAGCAGTCACGGA
TTCAAGCTGAAATTCAAGAAGGCTTGATGCGAACACGATTGGTTCCATTTTCCCGTTTGCTACCGCGTTTACAACGAATT
GTCCGTCAAACATCTTCAGCATTGAATAGACCTGCTGAGCTTTTTGTAAATAATACGGAAGGCGAGTTAGACAGAAACAT
TTTAGAGCGTTTAGTGACTCCGCTTGAGCATATGCTTAGAAACGCAATTGACCATGGTTTAGAAGACCGTATACAACGTC
AACAAGCGCATAAACCGGAAGCAGGACGTATTGAACTTAATATTCAGCGTCAAGGTACCGATGTTGTTGTTGTGTTTAGC
GATGATGGACAAGGTATTGATGTTGAAAAAGTTCGACAAAAAGCGCTGCTTGCTGGTCTCATCAAACCGGAACAACACTT
AGAACAGCAAGATATCTTGCAATTCATTTTCCATCCTGGTTTAAGTACAGCAGAACAGGTTACCCAGATTTCTGGGCGTG
GCGTTGGGCTTGATGTTGTACAAAGTGATATTAAGGCTTTAGGTGGGCATGTTAGCGTAGACTCTGTCTATGGGCAGGGA
ACAACATTTACTATCCGTGTACCAACTACGGTAGCTGTAAGTGATGCCTTAATGGTGAAAGTTGCAGATCAGCAATTTGC
GATTCCACTTGCTCAAATTGAGCGAATTATTCGAGTTTCGCCAGCATCTTTAGAACAGTATTTTGAGTGTCCTCAAGAAT
CATTTGAGTATGAAAACAAACGTTATCCATTACGTTATCTTTCAGAATTTGTTGGTAACCAACCAATACCACGACTAAGT
GATGTGATGTATTCATTACCCGTTTTAATGATTAAGGCGAATAACGGACAAACTGTGGCATTACTCGTTGATCAGTTAAT
TGGTTCTCGAGCACAGATTGTGGTGAAACCAATTGGACAACAGTTCTCTAGTATTGGAGCGATTGCAGGCGCCACAATTT
TAGGTGATGGCCAAGTATGTCTGATTTTGGATGGACAGAATATTGCTCGACAAATTCAGTCTACCCAACGACATAAAGAG
TTCAGTGAAGCAGGATATAGACAACGTGAATCTGACGAACGCCGACTTATCATGATTGTGGATGACTCAGTAACCGTACG
TAAGGTAACGTCCCGATTACTTGAGCGCCAAGGTTATGACGTTGTTACTGCAAAAGATGGTGTTGATGCGATAGAACAGT
TAGAAAATATTAAGCCAGATCTAATGCTGCTTGATATTGAAATGCCACGGATGGATGGCTTCGAAGTGCTCAACCTAGTT
AGACATCATGATATACATCAATACATGCCAATTATCATGATTACATCGAGAACTGGTGAAAAACACCGTGAACGAGCTTT
CTCATTAGGCGTGAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAGTTACTAGAAAATATCGATGCTTTACTTGTAG
TATCTGAAAGTGGGGTGAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

89.708

100

0.9