Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   RA179_RS07790 Genome accession   NZ_CP138201
Coordinates   1508126..1508590 (-) Length   154 a.a.
NCBI ID   WP_024121211.1    Uniprot ID   A0A9Q6A820
Organism   Bacillus halotolerans strain DY299     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1503126..1513590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA179_RS07770 (RA179_07770) kinA 1503590..1505422 (+) 1833 WP_095714840.1 sporulation histidine kinase KinA -
  RA179_RS07775 (RA179_07775) - 1505433..1506602 (-) 1170 WP_024121208.1 aminotransferase A -
  RA179_RS07780 (RA179_07780) - 1506804..1506965 (-) 162 WP_003238943.1 hypothetical protein -
  RA179_RS07785 (RA179_07785) cheV 1507173..1508084 (+) 912 WP_024121210.1 chemotaxis protein CheV -
  RA179_RS07790 (RA179_07790) kre 1508126..1508590 (-) 465 WP_024121211.1 YkyB family protein Regulator
  RA179_RS07795 (RA179_07795) - 1508716..1510008 (-) 1293 WP_024121212.1 MFS transporter -
  RA179_RS07800 (RA179_07800) - 1510084..1510578 (-) 495 WP_081638296.1 L,D-transpeptidase family protein -
  RA179_RS07805 (RA179_07805) - 1510636..1511496 (-) 861 WP_127695341.1 metallophosphoesterase -
  RA179_RS07810 (RA179_07810) fadH 1511641..1512405 (+) 765 WP_024121215.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17884.73 Da        Isoelectric Point: 10.4658

>NTDB_id=901334 RA179_RS07790 WP_024121211.1 1508126..1508590(-) (kre) [Bacillus halotolerans strain DY299]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=901334 RA179_RS07790 WP_024121211.1 1508126..1508590(-) (kre) [Bacillus halotolerans strain DY299]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCAAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAAAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGCCCGCTTATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.052

100

0.981