Detailed information NTG0901191

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ABGT20_RS13225
• Genome accession: NZ_CP157038
• Coordinates: 2452743..2453870 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain AR01-03
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2447743..2458870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGT20_RS13205 (ABGT20_13205)	-	2447790..2448002 (-)	213	Protein_2552	recombinase family protein	-
ABGT20_RS13210 (ABGT20_13210)	fumC	2448221..2449609 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
ABGT20_RS13215 (ABGT20_13215)	-	2449776..2450666 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
ABGT20_RS13220 (ABGT20_13220)	-	2451608..2452003 (+)	396	WP_014480327.1	VOC family protein	-
ABGT20_RS13225 (ABGT20_13225)	rapC	2452743..2453870 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
ABGT20_RS13230 (ABGT20_13230)	-	2454052..2455978 (+)	1927	Protein_2557	T7SS effector LXG polymorphic toxin	-
ABGT20_RS13235 (ABGT20_13235)	-	2455992..2456279 (+)	288	WP_014480331.1	hypothetical protein	-
ABGT20_RS13240 (ABGT20_13240)	-	2456682..2457122 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
ABGT20_RS13245 (ABGT20_13245)	-	2457221..2457673 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
ABGT20_RS13250 (ABGT20_13250)	cdiI	2457770..2458129 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
ABGT20_RS13255 (ABGT20_13255)	-	2458201..2458713 (+)	513	WP_014477426.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=901191 ABGT20_RS13225 WP_014480328.1 2452743..2453870(-) (rapC) [Bacillus subtilis strain AR01-03]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=901191 ABGT20_RS13225 WP_014480328.1 2452743..2453870(-) (rapC) [Bacillus subtilis strain AR01-03]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397