Detailed information NTG0901174

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: SBO70_RS07770
• Genome accession: NZ_CP137890
• Coordinates: 1543879..1545015 (-)
• Length: 378 a.a.
• NCBI ID: WP_105322066.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GJJK74
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1538879..1550015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SBO70_RS07730 (SBO70_07730)	-	1539410..1539628 (+)	219	WP_014417667.1	helix-turn-helix transcriptional regulator	-
SBO70_RS07735 (SBO70_07735)	-	1539676..1539957 (+)	282	WP_014417668.1	hypothetical protein	-
SBO70_RS07740 (SBO70_07740)	-	1540010..1540255 (-)	246	WP_105322064.1	helix-turn-helix domain-containing protein	-
SBO70_RS07745 (SBO70_07745)	-	1540758..1541477 (+)	720	WP_105322065.1	hypothetical protein	-
SBO70_RS07750 (SBO70_07750)	-	1541513..1541821 (-)	309	WP_234015358.1	hypothetical protein	-
SBO70_RS07755 (SBO70_07755)	-	1541834..1543258 (-)	1425	WP_105322157.1	lipase	-
SBO70_RS07760 (SBO70_07760)	-	1543308..1543673 (+)	366	WP_014417672.1	DUF1433 domain-containing protein	-
SBO70_RS07765 (SBO70_07765)	-	1543716..1543889 (-)	174	WP_169061491.1	hypothetical protein	-
SBO70_RS07770 (SBO70_07770)	rapC	1543879..1545015 (-)	1137	WP_105322066.1	RapH N-terminal domain-containing protein	Regulator
SBO70_RS07775 (SBO70_07775)	-	1545340..1546284 (-)	945	WP_105322067.1	hypothetical protein	-
SBO70_RS07780 (SBO70_07780)	-	1546537..1547271 (-)	735	WP_105322068.1	hypothetical protein	-
SBO70_RS07785 (SBO70_07785)	-	1547362..1549983 (-)	2622	WP_113708627.1	phage tail protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44715.08 Da
• Isoelectric Point: 4.8237

>NTDB_id=901174 SBO70_RS07770 WP_105322066.1 1543879..1545015(-) (rapC) [Bacillus velezensis strain GJJK74]
MKQLISSSKVGVKINEWYKYIRMFSVPDAEVLKSEVEQEINAMEEDQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPEIS
DLLEKIESSQAKLKGILEYYFNFFRGMYEFEEYEYLKAISFYKQAEKKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIESYRAHETYSVREIQCSFVIGLNYLDMEYPEKAIPHFQKAYKKALEIDMPRLAGSALYNLGISSFSEEKFDEAI
EYFKEGVLVYEQNGYEHANRLLDILFMLAKTNFKVNKKTEGTAVYNHGLSLAKNLNDEVLTKMFDFLNALYIDDNKEMLN
EILTYLEFKTMFSDVEDLATDAAKYYTKNEDHKAAGLFYEKVLYAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=901174 SBO70_RS07770 WP_105322066.1 1543879..1545015(-) (rapC) [Bacillus velezensis strain GJJK74]
TTGAAACAGTTAATCTCCTCATCAAAAGTCGGCGTGAAGATTAATGAGTGGTACAAGTATATTCGTATGTTTAGTGTTCC
TGATGCAGAGGTGCTAAAATCAGAAGTTGAACAAGAAATAAACGCTATGGAAGAAGATCAAGATTTATTGTTGTACTATT
CCCTCATGTGTTTTAGGCATCAATTAATGCTTGATTACCTAGAACCAAAAACGATGAACGAAGAGCGCCCTGAGATTTCA
GACTTATTAGAAAAGATCGAAAGTAGCCAAGCTAAATTGAAAGGAATTCTTGAATATTATTTTAACTTTTTCCGTGGGAT
GTATGAATTTGAAGAATACGAATATCTTAAAGCGATAAGTTTTTACAAACAAGCGGAAAAGAAGTTGTCACTTGTAGCCG
ACGAAATTGAGCGAGCGGAGTTTCATTACAAAGTCGCTGAAATTTATTATCACATGAAACAAACACACATGTCGATGCAC
CATATTGTTCAAGCAATCGAAAGCTACAGAGCGCATGAAACCTATTCTGTTAGAGAAATTCAATGTTCTTTTGTTATTGG
TCTAAATTATTTAGACATGGAGTATCCAGAAAAGGCTATCCCTCATTTTCAAAAAGCTTATAAAAAAGCACTTGAAATTG
ATATGCCAAGATTAGCTGGATCCGCTCTTTATAATTTAGGGATCTCCTCGTTTTCTGAAGAAAAGTTCGACGAGGCTATT
GAGTATTTCAAAGAAGGAGTGTTGGTCTATGAGCAAAACGGATATGAACATGCTAACCGCTTATTAGACATTCTTTTCAT
GTTAGCGAAAACGAACTTTAAAGTAAATAAGAAAACTGAAGGAACAGCTGTTTATAATCATGGACTGTCATTGGCTAAAA
ACTTAAATGATGAAGTATTAACCAAAATGTTTGATTTCCTAAATGCCCTTTACATTGACGATAACAAAGAAATGCTAAAT
GAGATTCTTACTTATTTAGAATTTAAAACAATGTTTTCCGACGTGGAGGACTTAGCAACCGACGCAGCGAAGTATTATAC
AAAAAATGAAGACCATAAAGCAGCTGGATTATTTTATGAGAAAGTGCTTTATGCCCAAAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (222-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.413	100	0.484
rapF	Bacillus subtilis subsp. subtilis str. 168	45.669	100	0.46