Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   SBO70_RS05790 Genome accession   NZ_CP137890
Coordinates   1147385..1147576 (+) Length   63 a.a.
NCBI ID   WP_061861349.1    Uniprot ID   -
Organism   Bacillus velezensis strain GJJK74     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1142385..1152576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SBO70_RS05760 (SBO70_05760) argF 1143236..1144207 (+) 972 WP_061046905.1 ornithine carbamoyltransferase -
  SBO70_RS05765 (SBO70_05765) - 1144283..1144462 (+) 180 WP_003155070.1 YjzC family protein -
  SBO70_RS05770 (SBO70_05770) - 1144500..1144685 (-) 186 WP_007409129.1 YjzD family protein -
  SBO70_RS05775 (SBO70_05775) - 1144946..1145680 (+) 735 WP_015417203.1 hypothetical protein -
  SBO70_RS05780 (SBO70_05780) - 1145763..1146329 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  SBO70_RS05785 (SBO70_05785) med 1146419..1147372 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  SBO70_RS05790 (SBO70_05790) comZ 1147385..1147576 (+) 192 WP_061861349.1 ComZ family protein Regulator
  SBO70_RS05795 (SBO70_05795) - 1147605..1147823 (-) 219 WP_007409123.1 hypothetical protein -
  SBO70_RS05800 (SBO70_05800) - 1147991..1148929 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  SBO70_RS05805 (SBO70_05805) fabF 1148952..1150190 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  SBO70_RS05810 (SBO70_05810) - 1150273..1151058 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  SBO70_RS05815 (SBO70_05815) - 1151232..1152218 (+) 987 WP_031378493.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7231.38 Da        Isoelectric Point: 4.2259

>NTDB_id=901164 SBO70_RS05790 WP_061861349.1 1147385..1147576(+) (comZ) [Bacillus velezensis strain GJJK74]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMVEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=901164 SBO70_RS05790 WP_061861349.1 1147385..1147576(+) (comZ) [Bacillus velezensis strain GJJK74]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGTGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778