Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ABGT20_RS00220 Genome accession   NZ_CP157038
Coordinates   41108..41935 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain AR01-03     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36108..46935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGT20_RS00195 (ABGT20_00195) yaaO 37171..38613 (+) 1443 WP_014478592.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ABGT20_RS00200 (ABGT20_00200) tmk 38610..39248 (+) 639 WP_003226776.1 dTMP kinase -
  ABGT20_RS00205 (ABGT20_00205) darA 39322..39651 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ABGT20_RS00210 (ABGT20_00210) yaaR 39664..40104 (+) 441 WP_009966249.1 YaaR family protein -
  ABGT20_RS00215 (ABGT20_00215) holB 40116..41105 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  ABGT20_RS00220 (ABGT20_00220) yaaT 41108..41935 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ABGT20_RS00225 (ABGT20_00225) yabA 41950..42309 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  ABGT20_RS00230 (ABGT20_00230) trmNF 42368..43111 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ABGT20_RS00235 (ABGT20_00235) yazA 43098..43397 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ABGT20_RS00240 (ABGT20_00240) rsmI 43372..44250 (+) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ABGT20_RS00245 (ABGT20_00245) abrB 44299..44589 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=901093 ABGT20_RS00220 WP_003226767.1 41108..41935(+) (yaaT) [Bacillus subtilis strain AR01-03]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=901093 ABGT20_RS00220 WP_003226767.1 41108..41935(+) (yaaT) [Bacillus subtilis strain AR01-03]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996